AutismKB 2.0

Annotation Detail for TET2


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Basic Information Top
Gene Symbol:TET2 ( FLJ20032,KIAA1546,MGC125715 )
Gene Full Name: tet oncogene family member 2
Band: 4q24
Quick LinksEntrez ID:54790; OMIM: 612839; Uniprot ID:TET2_HUMAN; ENSEMBL ID: ENSG00000168769; HGNC ID: 25941
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
53N6-acetyllysine.
97Phosphothreonine.
99Phosphoserine.
1107Phosphoserine.
1345Phosphotyrosine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017628
  • Location:chr4 106287391-106383376
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 106281573 106281840 267 5685
CTCF CD4SISSRdata 106281573 106281840 267 5685
CTCF G2GSE9613 106281605 106281901 296 5639
CTCF G2GSE9613 106287072 106287573 501 69
H3K4me3 colorectalcancer 106285581 106286835 1254 1184
H3ac HepG2E 106286098 106286835 737 925
PHF8 293TGSE20725 106286769 106287959 1190 28
hScc1 BcellGSE12603 106281390 106281901 511 5746
hScc1 BcellGSE12603 106286835 106287633 798 158
hScc1 CdLSGSE12603 106281390 106281901 511 5746
hScc1 CdLSGSE12603 106287031 106287704 673 24
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 106395010 106395036 26 11647
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 106299489 106299680 191 0
H3K4me3 colorectalcancer 106287325 106288885 1560 0
H3ac HepG2E 106287532 106288816 1284 0
Myc K562GSE19551 106302700 106303073 373 0
Oct1 H2O2-HelaGSE14283 106333458 106333486 28 0
Oct1 HelaGSE14283 106289752 106289781 29 0
Oct1 HelaGSE14283 106328735 106328783 48 0
Oct1 HelaGSE14283 106333757 106333791 34 0
Oct1 HelaGSE14283 106365324 106365354 30 0
Oct1 HelaGSE14283 106377268 106377299 31 0
p130 QuiescentGSE19898 106287466 106287931 465 0
p130 SenescentGSE19898 106287371 106287857 486 0
p130 shRbSenescentGSE19898 106287529 106287699 170 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
20041 mRNA FLJ20032 chr4 106424635 106521532 71418 EST chr4 106450114 106613244 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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