AutismKB 2.0

Annotation Detail for DCHS2


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Basic Information Top
Gene Symbol:DCHS2 ( CDH27,CDHJ,CDHR7,FLJ20047,PCDH23,PCDHJ )
Gene Full Name: dachsous 2 (Drosophila)
Band: 4q31.3
Quick LinksEntrez ID:54798; OMIM: 612486; Uniprot ID:PCD23_HUMAN; ENSEMBL ID: ENSG00000197410; HGNC ID: 23111
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
220N-linked (GlcNAc...) (Potential).
245N-linked (GlcNAc...) (Potential).
406N-linked (GlcNAc...) (Potential).
467N-linked (GlcNAc...) (Potential).
539N-linked (GlcNAc...) (Potential).
673N-linked (GlcNAc...) (Potential).
820N-linked (GlcNAc...) (Potential).
1032N-linked (GlcNAc...) (Potential).
1140N-linked (GlcNAc...) (Potential).
1209N-linked (GlcNAc...) (Potential).
1443N-linked (GlcNAc...) (Potential).
1599N-linked (GlcNAc...) (Potential).
1615N-linked (GlcNAc...) (Potential).
1874N-linked (GlcNAc...) (Potential).
2024N-linked (GlcNAc...) (Potential).
2042N-linked (GlcNAc...) (Potential).
2100N-linked (GlcNAc...) (Potential).
2209N-linked (GlcNAc...) (Potential).
2474N-linked (GlcNAc...) (Potential).
2522N-linked (GlcNAc...) (Potential).
2635N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017639
  • Location:chr4 155375138-155531898
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 155373695 155373837 142 1373
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 155469961 155470148 187 0
CTCF CD4SISSRdata 155469961 155470148 187 0
CTCF G2GSE9613 155375619 155375931 312 0
CTCF G2GSE9613 155395588 155396231 643 0
CTCF G2GSE9613 155398728 155398944 216 0
CTCF G2GSE9613 155411161 155411456 295 0
CTCF G2GSE9613 155443156 155443367 211 0
CTCF G2GSE9613 155470081 155470365 284 0
CTCF G2GSE9613 155473554 155473792 238 0
Nanog ESGSE20650 155453650 155453992 342 0
Nanog ESGSE20650 155473600 155474110 510 0
Nanog hESGSE18292 155417709 155418121 412 0
hScc1 CdLSGSE12603 155469694 155470340 646 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
20351 mRNA chr4 155611645 155613925 843 mRNA DCHS2 chr4 155513292 155670054Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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