AutismKB 2.0

Annotation Detail for DYM


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Basic Information Top
Gene Symbol:DYM ( DMC,FLJ20071,FLJ90130,SMC )
Gene Full Name: dymeclin
Band: 18q21.1
Quick LinksEntrez ID:54808; OMIM: 607461; Uniprot ID:DYM_HUMAN; ENSEMBL ID: ENSG00000141627; HGNC ID: 21317
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
458Phosphotyrosine.
Location(AA) Modifications Resource
282N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
293N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
411N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
421N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
450N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
469N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
25Phosphoserine(IKK)HMM predict
46Phosphoserine(IKK)HMM predict
63Phosphoserine(IKK)HMM predict
111S-palmitoylHMM predict
112S-palmitoylHMM predict
139N-linkedHMM predict
140Phosphotyrosine(INSR)HMM predict
142Phosphoserine(CK2)HMM predict
142Phosphoserine(CK2)HMM predict
142Phosphoserine(ATM)HMM predict
277Phosphoserine(CK1)HMM predict
278Phosphoserine(CDC2)HMM predict
293N-linkedHMM predict
304Phosphotyrosine(Abl)HMM predict
318Phosphoserine(ATM)HMM predict
318Phosphoserine(CDK)HMM predict
344Phosphothreonine(CK2)HMM predict
411N-linkedHMM predict
421N-linkedHMM predict
450N-linkedHMM predict
510Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017653
  • Location:chr18 44824171-45241076
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Myc K562GSE19551 45240705 45241501 796 27
Rb GrowingGSE19898 45241026 45241235 209 54
Rb SenescentGSE19898 45240908 45241254 346 5
USF1 HepG2E 45241528 45241746 218 561
hScc1 BcellGSE12603 45250223 45250496 273 9283
p130 QuiescentGSE19898 45241001 45241181 180 15
p130 SenescentGSE19898 45241037 45241220 183 52
p130 shRbQuiescentGSE19898 45240809 45241402 593 29
p130 shRbSenescentGSE19898 45240956 45241258 302 31
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 44812465 44812586 121 11646
CTCF CD4GSE12889 44822299 44822603 304 1721
CTCF CD4SISSRdata 44812465 44812586 121 11646
CTCF CD4SISSRdata 44822299 44822603 304 1721
Oct1 HelaGSE14283 44814418 44814453 35 9736
hScc1 BcellGSE12603 44806164 44806350 186 17915
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 45195724 45196021 297 0
CTCF CD4GSE12889 45228209 45228474 265 0
CTCF CD4SISSRdata 45195724 45196021 297 0
CTCF CD4SISSRdata 45228209 45228474 265 0
CTCF G2GSE9613 45240441 45241036 595 0
ER E2-MCF7GSE14664 44933267 44933313 46 0
ER E2-MCF7GSE14664 44980937 44980972 35 0
ER Fulvestrant-MCF7GSE14664 44953065 44953098 33 0
ER MCF7GSE19013 45093180 45093725 545 0
ETS1 JurkatGSE17954 45240386 45241420 1034 0
Fos K562GSE19551 44891472 44892050 578 0
FoxA1 MCF7MACSdata 45123177 45123337 160 0
Gata2 K562GSE18868 44852881 44853458 577 0
H3ac HepG2E 45239737 45240173 436 0
KLF4 hESGSE17917 44843186 44843353 167 0
Myc K562GSE19551 45228167 45228524 357 0
Myc hESGSE17917 44852324 44852585 261 0
Nanog ESGSE20650 45099967 45100384 417 0
Nanog hESGSE18292 44983902 44984098 196 0
Nanog hESGSE18292 45181198 45181466 268 0
Nanog hESGSE18292 45228175 45228500 325 0
Oct1 H2O2-HelaGSE14283 44859682 44859745 63 0
Oct1 H2O2-HelaGSE14283 45071137 45071164 27 0
Oct1 H2O2-HelaGSE14283 45081495 45081525 30 0
Oct1 H2O2-HelaGSE14283 45142175 45142211 36 0
Oct1 H2O2-HelaGSE14283 45181392 45181430 38 0
Oct1 HelaGSE14283 44845733 44845766 33 0
Oct1 HelaGSE14283 44885030 44885071 41 0
Oct1 HelaGSE14283 44892283 44892313 30 0
Oct1 HelaGSE14283 44933265 44933298 33 0
Oct1 HelaGSE14283 44933547 44933600 53 0
Oct1 HelaGSE14283 44980938 44980971 33 0
Oct1 HelaGSE14283 44992710 44992765 55 0
Oct1 HelaGSE14283 45081495 45081527 32 0
Oct1 HelaGSE14283 45142175 45142211 36 0
Oct1 HelaGSE14283 45181391 45181433 42 0
Oct1 HelaGSE14283 45193186 45193219 33 0
Oct1 HelaGSE14283 45228590 45228617 27 0
P300 T0-glioblastomaGSE21026 44875075 44876231 1156 0
PHF8 293TGSE20725 45240363 45241314 951 0
PHF8 HeLaGSE20725 45240475 45241459 984 0
PHF8 Hs68plusFBSGSE20725 45240308 45241404 1096 0
Rb shRbQuiescentGSE19898 45166790 45166953 163 0
STAT1 IFNSISSRdata 44906259 44906902 643 0
TFAP2C MCF7GSE21234 45025724 45026094 370 0
USF1 HepG2E 45239494 45240509 1015 0
USF1 HepG2E 45240927 45241166 239 0
VDR GM10861-stimGSE22484 45239543 45241711 2168 0
hScc1 BcellGSE12603 44842607 44843040 433 0
hScc1 BcellGSE12603 44943019 44943225 206 0
hScc1 BcellGSE12603 44951916 44952185 269 0
hScc1 BcellGSE12603 44959129 44959627 498 0
hScc1 BcellGSE12603 45240441 45241166 725 0
p130 QuiescentGSE19898 44881168 44881368 200 0
p130 shRbQuiescentGSE19898 44833051 44833631 580 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12150 HTC chr18 44804070 44828842 4673 mRNA DYM chr18 44824169 45241077 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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