Annotation Detail for ZNF280D

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Basic Information Top

Gene Symbol:	ZNF280D ( MGC21637,MGC61687,SUHW4,ZNF634 )
Gene Full Name:	zinc finger protein 280D
Band:	15q21.2
Quick Links	Entrez ID:54816; OMIM: NA; Uniprot ID:Z280D_HUMAN; ENSEMBL ID: ENSG00000137871; HGNC ID: 25953
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:2 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
530	Phosphoserine.
545	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001002843
Location:chr15 54709666-54813078
strand:-

Upstream the gene:0 results
Downstream the gene:1 results
Inside the gene:11 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Oct1	Hela	GSE14283	54704814	54704846	32	4837

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ER	E2-MCF7	GSE14664	54736915	54736947	32	0
ER	E2-MCF7	GSE14664	54740733	54740772	39	0
ER	E2-MCF7	GSE14664	54756132	54756163	31	0
Oct1	H2O2-Hela	GSE14283	54720853	54720894	41	0
Oct1	H2O2-Hela	GSE14283	54770736	54770763	27	0
Oct1	Hela	GSE14283	54720853	54720890	37	0
Oct1	Hela	GSE14283	54723054	54723090	36	0
Oct1	Hela	GSE14283	54773902	54773938	36	0
RNAII	Tamoxifen-MCF7	GSE14664	54756114	54756178	64	0
RNAII	Tamoxifen-MCF7	GSE14664	54769669	54769746	77	0
TAF	Hela	GSE8489	54742813	54743129	316	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
8861	EST		chr15	54711012	54737062	208	mRNA	SUHW4	chr15	54709667	54813079	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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