Annotation Detail for MFSD6

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Basic Information Top

Gene Symbol:	MFSD6 ( FLJ20160,MMR2,hMMR2 )
Gene Full Name:	major facilitator superfamily domain containing 6
Band:	2q32.2
Quick Links	Entrez ID:54842; OMIM: 613476; Uniprot ID:MFSD6_HUMAN; ENSEMBL ID: ENSG00000151690; HGNC ID: 24711
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
10	Phosphothreonine (By similarity).

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_017694
Location:chr2 191008943-191075045
strand:+

Upstream the gene:4 results
Downstream the gene:1 results
Inside the gene:8 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ER	MCF7	GSE19013	190990011	190990642	631	18617
FOXA1	MCF7	GSE15244	190990052	190990749	697	18543
RARA	MCF7	GSE15244	190989936	190990437	501	18757
TFAP2C	MCF7	GSE21234	190991486	190992191	705	17105

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
hScc1	Bcell	GSE12603	191085789	191086117	328	10908

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Gata2	K562	GSE18868	191032739	191033245	506	0
Gata2	K562	GSE18868	191035370	191036083	713	0
Myc	K562	GSE19551	191032865	191033227	362	0
Nanog	ES	GSE20650	191062317	191062892	575	0
Nanog	hES	GSE18292	191062595	191063010	415	0
p130	Quiescent	GSE19898	191042269	191042471	202	0
p130	Quiescent	GSE19898	191042806	191042971	165	0
p130	Senescent	GSE19898	191042155	191042441	286	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
15412	mRNA	FLJ20160	chr2	191126204	191192307	509	EST		chr2	191191227	191191736	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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