AutismKB 2.0

Annotation Detail for WHSC1L1


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Basic Information Top
Gene Symbol:WHSC1L1 ( DKFZp667H044,FLJ20353,MGC126766,MGC142029,NSD3,pp14328 )
Gene Full Name: Wolf-Hirschhorn syndrome candidate 1-like 1
Band: 8p11.2
Quick LinksEntrez ID:54904; OMIM: 607083; Uniprot ID:NSD3_HUMAN; ENSEMBL ID: ENSG00000147548; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
556Phosphothreonine.
571Phosphoserine.
790N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
36N-linkedHMM predict
37N-linkedHMM predict
47Phosphothreonine(MAPK)HMM predict
49Phosphotyrosine(Syk)HMM predict
94N-linkedHMM predict
98N-linkedHMM predict
105N-linkedHMM predict
129O-linkedHMM predict
138O-linkedHMM predict
138O-linkedHMM predict
150Phosphoserine(CDC2)HMM predict
183Phosphoserine(CK2)HMM predict
188Phosphoserine(CK1)HMM predict
200Phosphoserine(PKG)HMM predict
208Phosphoserine(CK1)HMM predict
233Phosphothreonine(PKC)HMM predict
255O-linkedHMM predict
336Phosphotyrosine(Syk)HMM predict
351Phosphoserine(CK1)HMM predict
394SulfotyrosineHMM predict
404Phosphoserine(ATM)HMM predict
414Phosphothreonine(PKC)HMM predict
419Phosphothreonine(PKC)HMM predict
424Phosphoserine(IKK)HMM predict
441Phosphoserine(CK1)HMM predict
441Phosphoserine(IKK)HMM predict
443Phosphoserine(CK2)HMM predict
443Phosphoserine(CK1)HMM predict
451PhosphoserineHMM predict
456Phosphothreonine(CK2)HMM predict
456Phosphothreonine(PKA)HMM predict
457Phosphoserine(PKA)HMM predict
457Phosphoserine(PKG)HMM predict
457Phosphoserine(PKB)HMM predict
477MethyllysineHMM predict
478Phosphoserine(IKK)HMM predict
511N-linkedHMM predict
531N-linkedHMM predict
561O-linkedHMM predict
561Phosphoserine(CDC2)HMM predict
561Phosphoserine(MAPK)HMM predict
565O-linkedHMM predict
568O-linkedHMM predict
585Phosphoserine(CAMK2)HMM predict
590Phosphoserine(CK1)HMM predict
651Phosphoserine(PKB)HMM predict
671Phosphoserine(CDC2)HMM predict
671Phosphoserine(IKK)HMM predict
675O-linkedHMM predict
675O-linkedHMM predict
681O-linkedHMM predict
685Phosphoserine(IKK)HMM predict
695Phosphothreonine(PKA)HMM predict
695Phosphothreonine(PKC)HMM predict
770S-palmitoylHMM predict
822S-palmitoylHMM predict
849N-linkedHMM predict
855Phosphoserine(PKA)HMM predict
856N-linkedHMM predict
861N-linkedHMM predict
894N-linkedHMM predict
897N-linkedHMM predict
910Phosphoserine(CDK)HMM predict
925S-palmitoylHMM predict
926S-palmitoylHMM predict
929S-palmitoylHMM predict
1008Phosphotyrosine(Jak)HMM predict
1008PhosphotyrosineHMM predict
1008SulfotyrosineHMM predict
1009Phosphotyrosine(Jak)HMM predict
1009Phosphotyrosine(Jak)HMM predict
1034N-linkedHMM predict
1164Phosphoserine(PKG)HMM predict
1217N-linkedHMM predict
1223N-linkedHMM predict
1227N-linkedHMM predict
1229N-linkedHMM predict
1279N-linkedHMM predict
1290Phosphoserine(IKK)HMM predict
1351N-linkedHMM predict
1381S-palmitoylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017778
  • Location:chr8 38293092-38358946
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 38358329 38359756 1427 96
ETS1 JurkatGSE17954 38358384 38360210 1826 351
TFAP2C MCF7GSE21234 38358965 38359304 339 188
hScc1 CdLSGSE12603 38358628 38359649 1021 192
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me2 HCT116GSE10453 38357504 38358098 594 0
H3K4me3 colorectalcancer 38356872 38358821 1949 0
H3ac HepG2E 38356611 38358468 1857 0
TAF HelaGSE8489 38356953 38358265 1312 0
hScc1 BcellGSE12603 38358374 38359089 715 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
25312 EST chr8 38250044 38252233 200 mRNA WHSC1L1 chr8 38251716 38358947Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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