Annotation Detail for C12orf41
Basic Information Top
| Gene Symbol: | C12orf41 ( FLJ12670,FLJ20436 ) |
|---|---|
| Gene Full Name: | chromosome 12 open reading frame 41 |
| Band: | 12q13.11 |
| Quick Links | Entrez ID:54934; OMIM: NA; Uniprot ID:CL041_HUMAN; ENSEMBL ID: ENSG00000139620; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 168 | Phosphoserine. | |
| 172 | Phosphoserine. | |
| 175 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 168 | Phosphoserine. | Swiss-Prot 53.0 |
| 172 | Phosphoserine. | Swiss-Prot 53.0 |
| 175 | Phosphoserine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 63 | Phosphotyrosine(Jak) | HMM predict |
| 129 | Phosphoserine(ATM) | HMM predict |
| 131 | Phosphothreonine(MAPK) | HMM predict |
| 134 | Phosphoserine(CK2) | HMM predict |
| 149 | Phosphoserine(CK1) | HMM predict |
| 168 | Phosphoserine(IKK) | HMM predict |
| 172 | Phosphoserine(CK1) | HMM predict |
| 172 | Phosphoserine(IKK) | HMM predict |
| 260 | S-palmitoyl | HMM predict |
| 313 | N-linked | HMM predict |
| 338 | S-palmitoyl | HMM predict |
| 353 | Phosphoserine(IKK) | HMM predict |
| 393 | Phosphoserine(CK2) | HMM predict |
| 423 | Phosphoserine(MAPK) | HMM predict |
| 475 | Phosphoserine(IKK) | HMM predict |
| 475 | Phosphoserine(ATM) | HMM predict |
| 477 | Phosphoserine(IKK) | HMM predict |
- RefSeq ID: NM_017822
- Location:chr12 47333466-47362269
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 47361918 | 47362747 | 829 | 63 |
| H3ac | HepG2 | E | 47363356 | 47363610 | 254 | 1214 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 47361614 | 47362387 | 773 | 0 |
| FOXA1 | MCF7 | GSE15244 | 47361614 | 47362619 | 1005 | 0 |
| H3K4me3 | colorectal | cancer | 47361263 | 47361726 | 463 | 0 |
| H3ac | HepG2 | E | 47361263 | 47362266 | 1003 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 47361550 | 47362753 | 1203 | 0 |
| PHF8 | 293T | GSE20725 | 47361558 | 47362855 | 1297 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 47361682 | 47362738 | 1056 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 47361415 | 47362732 | 1317 | 0 |
| RARG | MCF7 | GSE15244 | 47361576 | 47362049 | 473 | 0 |
| Rb | Quiescent | GSE19898 | 47361788 | 47362003 | 215 | 0 |
| Rb | Senescent | GSE19898 | 47361820 | 47362410 | 590 | 0 |
| TAF | Hela | GSE8489 | 47359001 | 47359873 | 872 | 0 |
| TAF | Hela | GSE8489 | 47361263 | 47362294 | 1031 | 0 |
| TAF | k562 | GSE8489 | 47361263 | 47362511 | 1248 | 0 |
| hScc1 | Bcell | GSE12603 | 47361650 | 47362194 | 544 | 0 |
| p130 | Quiescent | GSE19898 | 47361752 | 47361994 | 242 | 0 |
| p130 | Quiescent | GSE19898 | 47362017 | 47362489 | 472 | 0 |
| p130 | Senescent | GSE19898 | 47361701 | 47362589 | 888 | 0 |
| p130 | shRbQuiescent | GSE19898 | 47361959 | 47362480 | 521 | 0 |
| p130 | shRbSenescent | GSE19898 | 47361639 | 47362494 | 855 | 0 |
Validated miRNA targets