AutismKB 2.0

Annotation Detail for SSH3


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Basic Information Top
Gene Symbol:SSH3 ( FLJ10928,FLJ20515,FLJ42240,SSH3L )
Gene Full Name: slingshot homolog 3 (Drosophila)
Band: 11q13.2
Quick LinksEntrez ID:54961; OMIM: 606780; Uniprot ID:SSH3_HUMAN; ENSEMBL ID: ENSG00000172830; HGNC ID: 30581
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
7Phosphoserine (By similarity).
9Phosphoserine (By similarity).
37Phosphoserine.
85Phosphoserine.
87Phosphoserine.
609Phosphoserine.
649Phosphoserine.
653Phosphoserine.
Location(AA) Modifications Resource
7Phosphoserine (By similarity).Swiss-Prot 53.0
649Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
9Phosphoserine(IKK)HMM predict
9Phosphoserine(CDC2)HMM predict
9Phosphoserine(ATM)HMM predict
13O-linkedHMM predict
13O-linkedHMM predict
13Phosphoserine(IKK)HMM predict
16O-linkedHMM predict
17Phosphothreonine(CDC2)HMM predict
37Phosphoserine(PKG)HMM predict
62Phosphoserine(CK1)HMM predict
65O-linkedHMM predict
70Phosphoserine(CK1)HMM predict
70Phosphoserine(CK2)HMM predict
87Phosphoserine(CDK)HMM predict
87Phosphoserine(CDC2)HMM predict
127Phosphotyrosine(Jak)HMM predict
140Phosphoserine(ATM)HMM predict
154Phosphoserine(CK2)HMM predict
174Phosphotyrosine(Syk)HMM predict
259O-linkedHMM predict
293Phosphoserine(CK1)HMM predict
356Phosphothreonine(PKA)HMM predict
494O-linkedHMM predict
495O-linkedHMM predict
518Phosphoserine(ATM)HMM predict
554Phosphoserine(CK2)HMM predict
554Phosphoserine(CK1)HMM predict
564Phosphoserine(CK1)HMM predict
568Phosphoserine(CK2)HMM predict
569Phosphoserine(CK1)HMM predict
614N-linkedHMM predict
649Phosphoserine(CAMK2)HMM predict
653Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017857
  • Location:chr11 66827576-66836645
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF pAbJurkat 66826781 66827876 1095 248
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 66841534 66841999 465 5121
CTCF CD4SISSRdata 66841534 66841999 465 5121
ETS1 JurkatGSE17954 66841098 66842327 1229 5067
FOXA1 MCF7GSE15244 66836611 66837205 594 263
FOXA1 MCF7GSE15244 66841269 66841479 210 4729
FoxA1 MCF7MACSdata 66836756 66837043 287 254
GATA3 MCF7GSE15244 66836577 66837205 628 246
Gata2 K562GSE18868 66836376 66837275 899 180
H3ac HepG2E 66842549 66842910 361 6084
PHF8 293TGSE20725 66841080 66842435 1355 5112
PHF8 HeLaGSE20725 66841133 66842538 1405 5190
RARA MCF7GSE15244 66836434 66837205 771 174
RARG MCF7GSE15244 66836470 66837205 735 192
Rb shRbQuiescentGSE19898 66841767 66841986 219 5231
TFAP2C MCF7GSE21234 66836109 66837276 1167 47
hScc1 BcellGSE12603 66841269 66842096 827 5037
hScc1 CdLSGSE12603 66841269 66842096 827 5037
hScc1 G2GSE9613 66841269 66842347 1078 5163
p130 SenescentGSE19898 66841885 66842114 229 5354
p130 shRbQuiescentGSE19898 66841082 66842053 971 4922
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 66835780 66836180 400 0
H3ac HepG2E 66829727 66830010 283 0
NRSF pAbJurkat 66834593 66835921 1328 0
TFAP2C MCF7GSE21234 66828010 66828345 335 0
hScc1 BcellGSE12603 66835380 66835852 472 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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