Annotation Detail for C2orf42
Basic Information Top
| Gene Symbol: | C2orf42 ( FLJ20558 ) |
|---|---|
| Gene Full Name: | chromosome 2 open reading frame 42 |
| Band: | 2p13.3 |
| Quick Links | Entrez ID:54980; OMIM: NA; Uniprot ID:CB042_HUMAN; ENSEMBL ID: ENSG00000115998; HGNC ID: 26056 |
| Relate to Another Database: | SFARIGene; denovo-db |
Post Translation Modification- RefSeq ID: NM_017880
- Location:chr2 70230522-70271654
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 70280210 | 70280336 | 126 | 8619 |
| ER | E2-MCF7 | GSE14664 | 70276108 | 70276148 | 40 | 4474 |
| TAF | k562 | GSE8489 | 70271748 | 70272507 | 759 | 473 |
| USF2 | HepG2 | E | 70271190 | 70272369 | 1179 | 125 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 70222301 | 70223669 | 1368 | 7538 |
| CTCF | G2 | GSE9613 | 70224178 | 70224395 | 217 | 6236 |
| ETS1 | Jurkat | GSE17954 | 70222786 | 70223828 | 1042 | 7216 |
| H3ac | HepG2 | E | 70212755 | 70214773 | 2018 | 16759 |
| H3ac | HepG2 | E | 70221362 | 70222722 | 1360 | 8481 |
| HIF1 | Hypo | HepG2 | 70223093 | 70223799 | 706 | 7077 |
| Nanog | hES | GSE18292 | 70221759 | 70222315 | 556 | 8486 |
| Oct1 | H2O2-Hela | GSE14283 | 70230378 | 70230406 | 28 | 131 |
| Oct1 | Hela | GSE14283 | 70214414 | 70214450 | 36 | 16091 |
| Oct1 | Hela | GSE14283 | 70230376 | 70230413 | 37 | 128 |
| P300 | T30-glioblastoma | GSE21026 | 70216286 | 70218266 | 1980 | 13247 |
| P300 | T30-glioblastoma | GSE21026 | 70222795 | 70224521 | 1726 | 6865 |
| PolII | HeLa | GSE12783 | 70212314 | 70213971 | 1657 | 17380 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 70216022 | 70216059 | 37 | 14482 |
| Rb | Growing | GSE19898 | 70223296 | 70223484 | 188 | 7133 |
| Rb | Quiescent | GSE19898 | 70223250 | 70223633 | 383 | 7081 |
| Rb | Senescent | GSE19898 | 70223074 | 70223639 | 565 | 7166 |
| Rb | Senescent | GSE19898 | 70223907 | 70224077 | 170 | 6531 |
| Rb | shRbQuiescent | GSE19898 | 70223184 | 70223424 | 240 | 7219 |
| Rb | shRbSenescence | GSE19898 | 70223115 | 70223538 | 423 | 7196 |
| TAF | k562 | GSE8489 | 70213762 | 70215069 | 1307 | 16107 |
| TAF | k562 | GSE8489 | 70221362 | 70222658 | 1296 | 8513 |
| TAF | k562 | GSE8489 | 70223729 | 70224178 | 449 | 6569 |
| TAF | k562 | GSE8489 | 70226412 | 70226926 | 514 | 3854 |
| TFAP2C | MCF7 | GSE21234 | 70221324 | 70222859 | 1535 | 8431 |
| TFAP2C | MCF7 | GSE21234 | 70223093 | 70223559 | 466 | 7197 |
| USF2 | HepG2 | E | 70221362 | 70222546 | 1184 | 8569 |
| hScc1 | Bcell | GSE12603 | 70221641 | 70222102 | 461 | 8651 |
| hScc1 | Bcell | GSE12603 | 70222546 | 70223669 | 1123 | 7415 |
| hScc1 | CdLS | GSE12603 | 70221462 | 70223764 | 2302 | 7910 |
| hScc1 | G2 | GSE9613 | 70222414 | 70223688 | 1274 | 7472 |
| p130 | Quiescent | GSE19898 | 70223079 | 70223256 | 177 | 7355 |
| p130 | Quiescent | GSE19898 | 70223286 | 70223593 | 307 | 7083 |
| p130 | Quiescent | GSE19898 | 70223931 | 70224159 | 228 | 6478 |
| p130 | Senescent | GSE19898 | 70212976 | 70213488 | 512 | 17291 |
| p130 | Senescent | GSE19898 | 70222208 | 70222569 | 361 | 8134 |
| p130 | Senescent | GSE19898 | 70223102 | 70223881 | 779 | 7031 |
| p130 | Senescent | GSE19898 | 70223964 | 70224252 | 288 | 6415 |
| p130 | shRbQuiescent | GSE19898 | 70223108 | 70224016 | 908 | 6961 |
| p130 | shRbSenescent | GSE19898 | 70212808 | 70213440 | 632 | 17399 |
| p130 | shRbSenescent | GSE19898 | 70223112 | 70223712 | 600 | 7111 |
| p130 | shRbSenescent | GSE19898 | 70223813 | 70224108 | 295 | 6562 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 70270975 | 70271712 | 737 | 0 |
| ETS1 | Jurkat | GSE17954 | 70270673 | 70272230 | 1557 | 0 |
| Fos | K562 | GSE19551 | 70270816 | 70272090 | 1274 | 0 |
| H3K4me3 | colorectal | cancer | 70270514 | 70271014 | 500 | 0 |
| H3ac | HepG2 | E | 70270514 | 70271515 | 1001 | 0 |
| HIF1 | Hypo | HepG2 | 70270833 | 70271674 | 841 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 70247052 | 70247089 | 37 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 70263403 | 70263440 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 70263403 | 70263440 | 37 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 70270778 | 70272084 | 1306 | 0 |
| PHF8 | 293T | GSE20725 | 70270847 | 70272214 | 1367 | 0 |
| PHF8 | HeLa | GSE20725 | 70270618 | 70272022 | 1404 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 70270729 | 70272053 | 1324 | 0 |
| TAF | Hela | GSE8489 | 70270514 | 70270975 | 461 | 0 |
| TAF | k562 | GSE8489 | 70270514 | 70271254 | 740 | 0 |
| TFAP2C | MCF7 | GSE21234 | 70271032 | 70271876 | 844 | 0 |
| USF1 | HepG2 | E | 70270514 | 70272299 | 1785 | 0 |
| hScc1 | Bcell | GSE12603 | 70271347 | 70271748 | 401 | 0 |
| p130 | shRbQuiescent | GSE19898 | 70271006 | 70271809 | 803 | 0 |
| p63 | keratinocytes | GSE17611 | 70254786 | 70255695 | 909 | 0 |