AutismKB 2.0

Annotation Detail for PPP1CA


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Basic Information Top
Gene Symbol:PPP1CA ( MGC15877,MGC1674,PP-1A,PP1alpha,PPP1A )
Gene Full Name: protein phosphatase 1, catalytic subunit, alpha isozyme
Band: 11q13
Quick LinksEntrez ID:5499; OMIM: 176875; Uniprot ID:PP1A_HUMAN; ENSEMBL ID: ENSG00000172531; HGNC ID: 9281
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylserine.
306Phosphotyrosine (By similarity).
320Phosphothreonine.
Location(AA) Modifications Resource
320Phosphothreonine (CDK1;CDK2;CD)Phospho.ELM 6.0
Location(AA) Modification Resource
39S-palmitoylHMM predict
100Phosphoserine(PKG)HMM predict
172S-palmitoylHMM predict
318ProlineHMM predict
320Phosphothreonine(CDC2)HMM predict
320Phosphothreonine(MAPK)HMM predict
320Phosphothreonine(CDK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001008709
  • Location:chr11 66922227-66925951
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 66924415 66925108 693 0
H3ac HepG2E 66924415 66925147 732 0
PHF8 HeLaGSE20725 66924964 66926373 1409 0
PHF8 Hs68minusFBSGSE20725 66925347 66926353 1006 0
PHF8 Hs68plusFBSGSE20725 66925251 66926520 1269 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4767 mRNA RAD9A chr11 66915998 66922458 231 mRNA PPP1CA chr11 66922227 66925952Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018