AutismKB 2.0

Annotation Detail for USP47


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Basic Information Top
Gene Symbol:USP47 ( DKFZp686C13257,FLJ20727,TRFP )
Gene Full Name: ubiquitin specific peptidase 47
Band: 11p15.3
Quick LinksEntrez ID:55031; OMIM: NA; Uniprot ID:UBP47_HUMAN; ENSEMBL ID: ENSG00000170242; HGNC ID: 20076
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
122N6-acetyllysine.
832Phosphoserine.
836Phosphotyrosine.
910Phosphoserine.
1015Phosphothreonine (By similarity).
1353Phosphoserine.
Location(AA) Modifications Resource
832Phosphoserine.Swiss-Prot 53.0
910Phosphoserine.Swiss-Prot 53.0
910PhosphoserinePhospho.ELM 6.0
1015Phosphothreonine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
68Phosphothreonine(CDC2)HMM predict
85N-linkedHMM predict
143Phosphoserine(CK2)HMM predict
162Phosphoserine(IKK)HMM predict
169Phosphotyrosine(INSR)HMM predict
171Phosphoserine(ATM)HMM predict
181N-linkedHMM predict
187Phosphotyrosine(INSR)HMM predict
187Phosphotyrosine(Jak)HMM predict
336Phosphoserine(CDK)HMM predict
342Phosphoserine(CK2)HMM predict
362Phosphotyrosine(Jak)HMM predict
433Phosphoserine(PKB)HMM predict
433Phosphoserine(IKK)HMM predict
505Phosphotyrosine(INSR)HMM predict
543MethylarginineHMM predict
557Phosphotyrosine(SRC)HMM predict
557Phosphotyrosine(INSR)HMM predict
613S-palmitoylHMM predict
633Phosphothreonine(PKC)HMM predict
667Phosphotyrosine(INSR)HMM predict
667Phosphotyrosine(Syk)HMM predict
672SulfotyrosineHMM predict
733Phosphothreonine(PKC)HMM predict
739N-linkedHMM predict
775Phosphoserine(CAMK2)HMM predict
780Phosphothreonine(PKC)HMM predict
797Phosphoserine(CK2)HMM predict
884Phosphoserine(CK1)HMM predict
899Phosphoserine(CK1)HMM predict
944Phosphoserine(CK1)HMM predict
946Phosphoserine(CK1)HMM predict
955Phosphoserine(CK1)HMM predict
955Phosphoserine(PKB)HMM predict
956Phosphoserine(IKK)HMM predict
963Phosphoserine(CK1)HMM predict
967Phosphoserine(IKK)HMM predict
967Phosphoserine(CK1)HMM predict
989Phosphoserine(CK1)HMM predict
989Phosphoserine(IKK)HMM predict
1013Phosphoserine(IKK)HMM predict
1013Phosphoserine(CK1)HMM predict
1031Phosphotyrosine(SRC)HMM predict
1045Phosphoserine(CK1)HMM predict
1098N-linkedHMM predict
1151Phosphothreonine(PKC)HMM predict
1155Phosphoserine(PKG)HMM predict
1196Phosphotyrosine(Syk)HMM predict
1223Phosphoserine(IKK)HMM predict
1251Phosphoserine(CK1)HMM predict
1353Phosphoserine(CDK)HMM predict
1353Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017944
  • Location:chr11 11819545-11937445
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 11810952 11811606 654 8267
Oct1 H2O2-HelaGSE14283 11803675 11803705 30 15856
Oct1 H2O2-HelaGSE14283 11805684 11805715 31 13846
Oct1 H2O2-HelaGSE14283 11818418 11818446 28 1114
Oct1 HelaGSE14283 11803675 11803705 30 15856
Oct1 HelaGSE14283 11805684 11805715 31 13846
RARA MCF7GSE15244 11810857 11811551 694 8342
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
RNAII Tamoxifen-MCF7GSE14664 11937442 11937499 57 25
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 11887669 11888348 679 0
CTCF CD4GSE12889 11827378 11827684 306 0
CTCF CD4GSE12889 11873958 11874079 121 0
CTCF CD4GSE12889 11909662 11910051 389 0
CTCF CD4SISSRdata 11827378 11827684 306 0
CTCF CD4SISSRdata 11873958 11874079 121 0
CTCF CD4SISSRdata 11909662 11910051 389 0
H3K4me3 colorectalcancer 11820428 11821068 640 0
H3K4me3 colorectalcancer 11821320 11822059 739 0
H3ac HepG2E 11819369 11820041 672 0
H3ac HepG2E 11820390 11822203 1813 0
Myc K562GSE19551 11854698 11854997 299 0
Oct1 H2O2-HelaGSE14283 11868612 11868639 27 0
Oct1 HelaGSE14283 11868612 11868647 35 0
P300 T30-glioblastomaGSE21026 11887725 11888456 731 0
PAX3-FKHR Rh4GSE19063 11887436 11888624 1188 0
PHF8 293TGSE20725 11819206 11820881 1675 0
PHF8 Hs68minusFBSGSE20725 11819064 11821089 2025 0
PHF8 Hs68plusFBSGSE20725 11819218 11821127 1909 0
TAF HelaGSE8489 11820428 11822094 1666 0
TAF k562GSE8489 11820390 11822487 2097 0
TFAP2C MCF7GSE21234 11926796 11927161 365 0
hScc1 BcellGSE12603 11819716 11820428 712 0
hScc1 G2GSE9613 11819612 11820562 950 0
p130 shRbQuiescentGSE19898 11819317 11820208 891 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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