AutismKB 2.0

Annotation Detail for PDPR


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Basic Information Top
Gene Symbol:PDPR ( DKFZp686A088,DKFZp686D16130,FLJ10079,PDP3 )
Gene Full Name: pyruvate dehydrogenase phosphatase regulatory subunit
Band: 16q22.1
Quick LinksEntrez ID:55066; OMIM: NA; Uniprot ID:PDPR_HUMAN; ENSEMBL ID: ENSG00000090857; HGNC ID: 30264
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017990
  • Location:chr16 68705029-68752684
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
USF1 HepG2E 68704095 68705487 1392 239
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 68756575 68756736 161 3971
CTCF CD4SISSRdata 68756575 68756736 161 3971
CTCF HelaGSE12889 68756558 68756737 179 3963
CTCF G2GSE9613 68756608 68756923 315 4081
Myc K562GSE19551 68756515 68756875 360 4011
USF1 HepG2E 68756704 68756923 219 4129
hScc1 BcellGSE12603 68755078 68755382 304 2546
hScc1 BcellGSE12603 68756608 68756923 315 4081
hScc1 CdLSGSE12603 68756608 68756923 315 4081
hScc1 G2GSE9613 68756608 68756923 315 4081
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Breast-CancerGSE22609 68728045 68728472 427 0
ETS1 JurkatGSE17954 68705179 68706543 1364 0
FOXA1 MCF7GSE15244 68705040 68705617 577 0
Fos K562GSE19551 68705499 68705718 219 0
H3K4me2 HCT116GSE10453 68706214 68706490 276 0
H3K4me3 colorectalcancer 68704931 68706490 1559 0
H3ac HepG2E 68706140 68706490 350 0
H3ac HepG2E 68706990 68707463 473 0
Myc K562GSE19551 68705303 68705858 555 0
RARA MCF7GSE15244 68704824 68705513 689 0
USF1 HepG2E 68706990 68707463 473 0
hScc1 BcellGSE12603 68705143 68705985 842 0
p63 keratinocytesGSE17611 68732558 68733381 823 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10172 mRNA PDPR chr16 68705029 68752685 1471 mRNA LOC400541 chr16 68750360 68764852Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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