Annotation Detail for GPATCH2
Basic Information Top
| Gene Symbol: | GPATCH2 ( CT110,FLJ10252,FLJ21048,GPATC2,MGC74998,RP11-361K17.1 ) |
|---|---|
| Gene Full Name: | G patch domain containing 2 |
| Band: | 1q41 |
| Quick Links | Entrez ID:55105; OMIM: NA; Uniprot ID:GPTC2_HUMAN; ENSEMBL ID: ENSG00000092978; HGNC ID: 25499 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 50 | Phosphothreonine. | |
| 115 | Phosphoserine. | |
| 117 | Phosphoserine. | |
| 195 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 115 | Phosphoserine. | Swiss-Prot 53.0 |
| 117 | Phosphoserine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 39 | Phosphoserine(CK1) | HMM predict |
| 40 | Phosphoserine(CK2) | HMM predict |
| 58 | Phosphoserine(PKB) | HMM predict |
| 75 | Phosphoserine(PKC) | HMM predict |
| 76 | Phosphotyrosine(Jak) | HMM predict |
| 92 | Phosphoserine(CK1) | HMM predict |
| 94 | Phosphoserine(CK2) | HMM predict |
| 95 | Phosphoserine(IKK) | HMM predict |
| 115 | Phosphoserine(CK2) | HMM predict |
| 130 | Phosphoserine(IKK) | HMM predict |
| 155 | N-linked | HMM predict |
| 157 | Phosphothreonine(PKC) | HMM predict |
| 199 | Sulfotyrosine | HMM predict |
| 236 | N-linked | HMM predict |
| 239 | N-linked | HMM predict |
| 256 | Phosphoserine(CK1) | HMM predict |
| 258 | Phosphoserine(CK2) | HMM predict |
| 258 | Phosphoserine(ATM) | HMM predict |
| 261 | Phosphoserine(CK1) | HMM predict |
| 262 | O-linked | HMM predict |
| 262 | Phosphoserine(CK1) | HMM predict |
| 262 | Phosphoserine(IKK) | HMM predict |
| 264 | Phosphoserine(CK1) | HMM predict |
| 266 | O-linked | HMM predict |
| 288 | Phosphotyrosine(Syk) | HMM predict |
| 364 | O-linked | HMM predict |
| 382 | Phosphoserine(ATM) | HMM predict |
| 428 | Phosphothreonine(PKC) | HMM predict |
| 429 | Phosphoserine(PKB) | HMM predict |
| 515 | O-linked | HMM predict |
| 515 | Phosphoserine(IKK) | HMM predict |
| 517 | Phosphoserine(IKK) | HMM predict |
| 519 | O-linked | HMM predict |
| 520 | O-linked | HMM predict |
| 521 | Phosphothreonine(CDC2) | HMM predict |
- RefSeq ID: NM_018040
- Location:chr1 215670456-215871031
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 215870961 | 215871152 | 191 | 25 |
| CTCF | CD4 | SISSRdata | 215870961 | 215871152 | 191 | 25 |
| PHF8 | 293T | GSE20725 | 215870697 | 215871604 | 907 | 119 |
| PHF8 | HeLa | GSE20725 | 215870527 | 215871598 | 1071 | 31 |
| TFAP2C | MCF7 | GSE21234 | 215870641 | 215871527 | 886 | 53 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 215664557 | 215665604 | 1047 | 5376 |
| RARA | MCF7 | GSE15244 | 215664703 | 215665500 | 797 | 5355 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 215799638 | 215799808 | 170 | 0 |
| FOXA1 | MCF7 | GSE15244 | 215779202 | 215779801 | 599 | 0 |
| FoxA1 | MCF7 | MACSdata | 215756325 | 215756591 | 266 | 0 |
| FoxA1 | MCF7 | MACSdata | 215814667 | 215814819 | 152 | 0 |
| H3ac | HepG2 | E | 215869539 | 215870283 | 744 | 0 |
| Nanog | ES | GSE20650 | 215671392 | 215671674 | 282 | 0 |
| Nanog | ES | GSE20650 | 215791124 | 215791623 | 499 | 0 |
| Nanog | hES | GSE18292 | 215860974 | 215861180 | 206 | 0 |
| RARA | MCF7 | GSE15244 | 215779311 | 215779765 | 454 | 0 |
| RARA | MCF7 | GSE15244 | 215812316 | 215815402 | 3086 | 0 |
| RARG | MCF7 | GSE15244 | 215812744 | 215813762 | 1018 | 0 |
| TFAP2C | MCF7 | GSE21234 | 215758589 | 215759068 | 479 | 0 |
| hScc1 | Bcell | GSE12603 | 215860848 | 215861027 | 179 | 0 |
| p63 | keratinocytes | GSE17611 | 215696868 | 215697667 | 799 | 0 |
Validated miRNA targets