AutismKB 2.0

Annotation Detail for BSDC1


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Basic Information Top
Gene Symbol:BSDC1 ( DKFZp686B09139,FLJ10276 )
Gene Full Name: BSD domain containing 1
Band: 1p35.1
Quick LinksEntrez ID:55108; OMIM: NA; Uniprot ID:BSDC1_HUMAN; ENSEMBL ID: ENSG00000160058; HGNC ID: 25501
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
18Phosphotyrosine(Syk)HMM predict
26Phosphoserine(CK2)HMM predict
50O-linkedHMM predict
54O-linkedHMM predict
64Phosphothreonine(PKC)HMM predict
92Phosphoserine(CDC2)HMM predict
107PhosphothreonineHMM predict
166Phosphoserine(CDC2)HMM predict
214Phosphoserine(CK2)HMM predict
214Phosphoserine(PKG)HMM predict
258Phosphoserine(IKK)HMM predict
275Phosphothreonine(MAPK)HMM predict
275Phosphothreonine(CDK)HMM predict
277Phosphoserine(CK2)HMM predict
280Phosphoserine(CK1)HMM predict
282Phosphoserine(CK1)HMM predict
284Phosphoserine(CK1)HMM predict
287O-linkedHMM predict
313Phosphoserine(CK1)HMM predict
329O-linkedHMM predict
329Phosphoserine(ATM)HMM predict
338Phosphothreonine(MAPK)HMM predict
356Phosphothreonine(PKC)HMM predict
378Phosphothreonine(MAPK)HMM predict
418Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018045
  • Location:chr1 32603373-32632613
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32639103 32639276 173 6576
CTCF CD4GSE12889 32652171 32652399 228 19672
CTCF CD4SISSRdata 32639103 32639276 173 6576
CTCF CD4SISSRdata 32652171 32652399 228 19672
CTCF G2GSE9613 32638761 32639403 642 6469
ER MCF7GSE19013 32644450 32645351 901 12287
ER MCF7GSE19013 32651806 32652591 785 19585
FOXA1 MCF7GSE15244 32632054 32633268 1214 48
H3K4me2 HCT116GSE10453 32633054 32633514 460 671
H3ac HepG2E 32634116 32634343 227 1616
Myc K562GSE19551 32651937 32652579 642 19645
NRSF JurkatSISSRdata 32652192 32652367 175 19666
PHF8 293TGSE20725 32632040 32633543 1503 178
PHF8 HeLaGSE20725 32632111 32633440 1329 162
Rb QuiescentGSE19898 32639080 32639221 141 6537
TAFII hESGSE17917 32639098 32639515 417 6693
hScc1 BcellGSE12603 32638761 32639403 642 6469
hScc1 CdLSGSE12603 32638761 32639403 642 6469
p130 shRbQuiescentGSE19898 32632833 32633599 766 603
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32610463 32610689 226 0
CTCF CD4SISSRdata 32610463 32610689 226 0
Gata1 K562GSE18868 32629171 32629681 510 0
Gata2 K562GSE18868 32628985 32630122 1137 0
H3K4me2 HCT116GSE10453 32631267 32632003 736 0
H3K4me3 colorectalcancer 32631267 32632129 862 0
H3ac HepG2E 32627492 32627825 333 0
H3ac HepG2E 32629154 32629878 724 0
H3ac HepG2E 32631267 32633661 2394 0
Oct1 H2O2-HelaGSE14283 32608672 32608711 39 0
Oct1 H2O2-HelaGSE14283 32616603 32616633 30 0
Oct1 HelaGSE14283 32616603 32616632 29 0
TAF k562GSE8489 32628198 32628780 582 0
TAF k562GSE8489 32631267 32632453 1186 0
TFAP2C MCF7GSE21234 32632295 32632698 403 0
hScc1 CdLSGSE12603 32610389 32610873 484 0
p130 shRbQuiescentGSE19898 32632159 32632741 582 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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