Annotation Detail for TMEM39B
Basic Information Top
| Gene Symbol: | TMEM39B ( FLJ10315 ) |
|---|---|
| Gene Full Name: | transmembrane protein 39B |
| Band: | 1p35.2 |
| Quick Links | Entrez ID:55116; OMIM: NA; Uniprot ID:TM39B_HUMAN; ENSEMBL ID: ENSG00000121775; HGNC ID: 25510 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 8 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 8 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 8 | N-linked | HMM predict |
| 23 | Phosphoserine(ATM) | HMM predict |
| 23 | O-linked | HMM predict |
| 26 | O-linked | HMM predict |
| 27 | Phosphoserine(ATM) | HMM predict |
| 29 | Phosphoserine(IKK) | HMM predict |
| 31 | O-linked | HMM predict |
| 35 | Phosphoserine(IKK) | HMM predict |
| 37 | Phosphothreonine(PKC) | HMM predict |
| 37 | O-linked | HMM predict |
| 43 | Phosphothreonine(PKC) | HMM predict |
| 43 | Phosphothreonine(PKA) | HMM predict |
| 45 | Phosphoserine(IKK) | HMM predict |
| 45 | Phosphoserine(CK1) | HMM predict |
| 49 | O-linked | HMM predict |
| 52 | O-linked | HMM predict |
| 113 | O-linked | HMM predict |
| 241 | Phosphothreonine(PKC) | HMM predict |
| 392 | Phosphotyrosine(Syk) | HMM predict |
| 443 | Phosphoserine(ATM) | HMM predict |
| 460 | Phosphotyrosine(Syk) | HMM predict |
| 482 | Phosphoserine(CDC2) | HMM predict |
| 491 | Phenylalanine | HMM predict |
| 492 | Phenylalanine | HMM predict |
- RefSeq ID: NM_018056
- Location:chr1 32311115-32341051
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 32301696 | 32301979 | 283 | 9278 |
| CTCF | CD4 | SISSRdata | 32301696 | 32301979 | 283 | 9278 |
| H3ac | HepG2 | E | 32310041 | 32310786 | 745 | 702 |
| Nanog | hES | GSE18292 | 32299052 | 32299673 | 621 | 11753 |
| Oct1 | Hela | GSE14283 | 32301448 | 32301484 | 36 | 9650 |
| PHF8 | HeLa | GSE20725 | 32310339 | 32311690 | 1351 | 101 |
| PHF8 | Hs68plusFBS | GSE20725 | 32310209 | 32311769 | 1560 | 127 |
| Rb | shRbQuiescent | GSE19898 | 32310672 | 32310925 | 253 | 317 |
| TFAP2C | MCF7 | GSE21234 | 32300530 | 32301302 | 772 | 10200 |
| hScc1 | Bcell | GSE12603 | 32301712 | 32302170 | 458 | 9175 |
| hScc1 | CdLS | GSE12603 | 32301502 | 32302099 | 597 | 9315 |
| p130 | Quiescent | GSE19898 | 32310279 | 32310567 | 288 | 693 |
| p130 | Senescent | GSE19898 | 32310230 | 32311313 | 1083 | 344 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 32310933 | 32311438 | 505 | 0 |
| Fos | K562 | GSE19551 | 32339173 | 32340103 | 930 | 0 |
| H3ac | HepG2 | E | 32311474 | 32312691 | 1217 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 32310884 | 32311729 | 845 | 0 |
| hScc1 | Bcell | GSE12603 | 32311087 | 32311354 | 267 | 0 |
Validated miRNA targets