Annotation Detail for RBM28
Basic Information Top
| Gene Symbol: | RBM28 ( FLJ10377 ) |
|---|---|
| Gene Full Name: | RNA binding motif protein 28 |
| Band: | 7q32.1 |
| Quick Links | Entrez ID:55131; OMIM: 612074; Uniprot ID:RBM28_HUMAN; ENSEMBL ID: ENSG00000106344; HGNC ID: 21863 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| 122 | Phosphoserine. | |
| 202 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 2 | N-acetylalanine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 17 | Phosphoserine(CK2) | HMM predict |
| 25 | Phosphoserine(ATM) | HMM predict |
| 74 | N-linked | HMM predict |
| 84 | N-linked | HMM predict |
| 95 | Phosphoserine(CK2) | HMM predict |
| 195 | Phosphotyrosine(Syk) | HMM predict |
| 281 | Phosphoserine(CK2) | HMM predict |
| 284 | Phosphoserine(CK1) | HMM predict |
| 284 | Phosphoserine(CK2) | HMM predict |
| 284 | Phosphoserine(IKK) | HMM predict |
| 288 | Phosphoserine(CK1) | HMM predict |
| 288 | Phosphoserine(CK2) | HMM predict |
| 295 | Phosphoserine(CK1) | HMM predict |
| 308 | Phosphoserine(CK2) | HMM predict |
| 308 | Phosphoserine(CK1) | HMM predict |
| 309 | Phosphothreonine(CK2) | HMM predict |
| 346 | Phosphoserine | HMM predict |
| 346 | Phosphoserine(CK2) | HMM predict |
| 428 | Phosphothreonine(PKC) | HMM predict |
| 724 | N-linked | HMM predict |
- RefSeq ID: NM_018077
- Location:chr7 127737672-127771197
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 127774888 | 127775197 | 309 | 3845 |
| CTCF | CD4 | SISSRdata | 127774888 | 127775197 | 309 | 3845 |
| CTCF | G2 | GSE9613 | 127774660 | 127775426 | 766 | 3846 |
| CTCF | G2 | GSE9613 | 127775964 | 127776386 | 422 | 4978 |
| CTCF | G2 | GSE9613 | 127777852 | 127779871 | 2019 | 7664 |
| CTCF | G2 | GSE9613 | 127784759 | 127785495 | 736 | 13930 |
| CTCF | G2 | GSE9613 | 127786987 | 127787432 | 445 | 16012 |
| CTCF | G2 | GSE9613 | 127788082 | 127789343 | 1261 | 17515 |
| GABP | k562 | GSE8489 | 127772203 | 127772486 | 283 | 1147 |
| GABP | k562 | GSE8489 | 127772845 | 127773092 | 247 | 1771 |
| H3K27me3 | colorectal | cancer | 127776423 | 127777083 | 660 | 5556 |
| NRSF | pAb | Jurkat | 127784759 | 127785196 | 437 | 13780 |
| Oct1 | Hela | GSE14283 | 127786048 | 127786101 | 53 | 14877 |
| P300 | T0-glioblastoma | GSE21026 | 127770965 | 127771705 | 740 | 138 |
| Rb | Growing | GSE19898 | 127779557 | 127779653 | 96 | 8408 |
| TFAP2C | MCF7 | GSE21234 | 127770891 | 127771750 | 859 | 123 |
| TFAP2C | MCF7 | GSE21234 | 127784476 | 127785085 | 609 | 13583 |
| hScc1 | Bcell | GSE12603 | 127774790 | 127775461 | 671 | 3928 |
| hScc1 | Bcell | GSE12603 | 127778705 | 127779788 | 1083 | 8049 |
| hScc1 | Bcell | GSE12603 | 127784835 | 127785196 | 361 | 13818 |
| hScc1 | Bcell | GSE12603 | 127788654 | 127789231 | 577 | 17745 |
| hScc1 | CdLS | GSE12603 | 127774749 | 127775267 | 518 | 3811 |
| hScc1 | G2 | GSE9613 | 127774660 | 127775426 | 766 | 3846 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Nanog | hES | GSE18292 | 127726675 | 127727131 | 456 | 10770 |
| Oct1 | Hela | GSE14283 | 127732524 | 127732556 | 32 | 5133 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 127749449 | 127749723 | 274 | 0 |
| CTCF | CD4 | SISSRdata | 127749449 | 127749723 | 274 | 0 |
| CTCF | G2 | GSE9613 | 127749426 | 127750227 | 801 | 0 |
| ETS1 | Jurkat | GSE17954 | 127770645 | 127771574 | 929 | 0 |
| GABP | k562 | GSE8489 | 127769711 | 127771877 | 2166 | 0 |
| H3K4me3 | colorectal | cancer | 127769711 | 127770178 | 467 | 0 |
| H3K4me3 | colorectal | cancer | 127770423 | 127770935 | 512 | 0 |
| H3ac | HepG2 | E | 127769711 | 127770899 | 1188 | 0 |
| Myc | K562 | GSE19551 | 127770665 | 127771388 | 723 | 0 |
| Oct1 | Hela | GSE14283 | 127739939 | 127739976 | 37 | 0 |
| Oct1 | Hela | GSE14283 | 127762205 | 127762257 | 52 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 127770481 | 127771602 | 1121 | 0 |
| PHF8 | 293T | GSE20725 | 127770506 | 127771499 | 993 | 0 |
| PHF8 | HeLa | GSE20725 | 127770487 | 127771474 | 987 | 0 |
| PolII | HeLa | GSE12783 | 127770477 | 127771475 | 998 | 0 |
| p130 | Quiescent | GSE19898 | 127770921 | 127771397 | 476 | 0 |
| p130 | Senescent | GSE19898 | 127770713 | 127771451 | 738 | 0 |
| p130 | shRbQuiescent | GSE19898 | 127770669 | 127771428 | 759 | 0 |
| p130 | shRbSenescent | GSE19898 | 127770584 | 127771198 | 614 | 0 |
Validated miRNA targets