AutismKB 2.0

Annotation Detail for SRBD1


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Basic Information Top
Gene Symbol:SRBD1 ( FLJ10379 )
Gene Full Name: S1 RNA binding domain 1
Band: 2p21
Quick LinksEntrez ID:55133; OMIM: NA; Uniprot ID:SRBD1_HUMAN; ENSEMBL ID: ENSG00000068784; HGNC ID: 25521
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
89Phosphoserine (By similarity).
964Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
28Phosphoserine(CK2)HMM predict
31Phosphoserine(CK2)HMM predict
140Phosphoserine(CK1)HMM predict
140Phosphoserine(IKK)HMM predict
143Phosphoserine(PKG)HMM predict
150N-linkedHMM predict
152O-linkedHMM predict
154Phosphothreonine(MAPK)HMM predict
154Phosphothreonine(CDK)HMM predict
154O-linkedHMM predict
156Phosphoserine(CK1)HMM predict
157O-linkedHMM predict
158O-linkedHMM predict
202N-linkedHMM predict
203Phosphoserine(CK2)HMM predict
267Phosphothreonine(PKC)HMM predict
351Phosphotyrosine(INSR)HMM predict
466S-palmitoylHMM predict
532Phosphoserine(CDC2)HMM predict
532Phosphoserine(MAPK)HMM predict
556Phosphoserine(MAPK)HMM predict
589N-linkedHMM predict
597N-linkedHMM predict
633O-linkedHMM predict
793O-linkedHMM predict
877Phosphothreonine(PKC)HMM predict
890Phosphoserine(ATM)HMM predict
928N-linkedHMM predict
950N-linkedHMM predict
957Phosphoserine(PKG)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018079
  • Location:chr2 45469323-45691906
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 45691581 45692328 747 48
FOXA1 MCF7GSE15244 45707107 45707778 671 15536
USF1 HepG2E 45692384 45692727 343 649
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 45466191 45466225 34 3116
Oct1 HelaGSE14283 45466180 45466219 39 3124
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 45659193 45659454 261 0
CTCF CD4GSE12889 45691097 45691376 279 0
CTCF CD4SISSRdata 45659193 45659454 261 0
CTCF CD4SISSRdata 45691097 45691376 279 0
CTCF HelaGSE12889 45688477 45688625 148 0
CTCF G2GSE9613 45575196 45575851 655 0
CTCF G2GSE9613 45665823 45666189 366 0
CTCF G2GSE9613 45690970 45692209 1239 0
GABP k562GSE8489 45629534 45630157 623 0
GABP k562GSE8489 45689119 45689436 317 0
GABP k562GSE8489 45689935 45692727 2792 0
Gata2 K562GSE18868 45515974 45516422 448 0
H3K4me3 colorectalcancer 45690874 45691777 903 0
H3ac HepG2E 45690481 45692042 1561 0
HIF1 NormHepG2 45691007 45692181 1174 0
LIN9 G0GSE7516 45691168 45692078 910 0
LIN9 SGSE7516 45691343 45692181 838 0
Nanog ESGSE20650 45493405 45493958 553 0
Nanog hESGSE18292 45493242 45493951 709 0
Nanog hESGSE18292 45564784 45564953 169 0
Oct1 H2O2-HelaGSE14283 45527550 45527578 28 0
Oct1 H2O2-HelaGSE14283 45543617 45543644 27 0
Oct1 H2O2-HelaGSE14283 45550193 45550220 27 0
Oct1 HelaGSE14283 45496140 45496169 29 0
Oct1 HelaGSE14283 45543617 45543645 28 0
Oct1 HelaGSE14283 45550190 45550220 30 0
Oct1 HelaGSE14283 45558432 45558463 31 0
Oct1 HelaGSE14283 45558551 45558604 53 0
Oct1 HelaGSE14283 45570004 45570031 27 0
Oct1 HelaGSE14283 45675718 45675759 41 0
PHF8 HeLaGSE20725 45691178 45692234 1056 0
PolII HeLaGSE12783 45690799 45692910 2111 0
Sox2 hESGSE18292 45659216 45659628 412 0
TAF HelaGSE8489 45638446 45638576 130 0
TAF k562GSE8489 45629747 45630090 343 0
TAF k562GSE8489 45665823 45665967 144 0
TAF k562GSE8489 45689935 45691882 1947 0
TFAP2C MCF7GSE21234 45513140 45513385 245 0
USF1 HepG2E 45689935 45692006 2071 0
USF2 HepG2E 45689935 45690240 305 0
USF2 HepG2E 45690481 45691934 1453 0
hScc1 BcellGSE12603 45575275 45575619 344 0
hScc1 CdLSGSE12603 45575196 45575725 529 0
hScc1 CdLSGSE12603 45665823 45666276 453 0
hScc1 G2GSE9613 45575091 45576014 923 0
p130 QuiescentGSE19898 45691553 45692093 540 0
p130 SenescentGSE19898 45691575 45692182 607 0
p130 shRbQuiescentGSE19898 45691449 45692125 676 0
p130 shRbSenescentGSE19898 45691563 45692207 644 0
p130 SGSE7516 45691590 45692042 452 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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