Annotation Detail for TMEM38B
Basic Information Top
| Gene Symbol: | TMEM38B ( C9orf87,D4Ertd89e,FLJ10493,TRIC-B,TRICB,bA219P18.1 ) |
|---|---|
| Gene Full Name: | transmembrane protein 38B |
| Band: | 9q31.2 |
| Quick Links | Entrez ID:55151; OMIM: 611236; Uniprot ID:TM38B_HUMAN; ENSEMBL ID: ENSG00000095209; HGNC ID: 25535 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 262 | Phosphoserine. | |
| 264 | Phosphoserine. | |
| 279 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| No data |
- RefSeq ID: NM_018112
- Location:chr9 107496645-107577264
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 107493020 | 107493154 | 134 | 3559 |
| CTCF | CD4 | SISSRdata | 107493020 | 107493154 | 134 | 3559 |
| ER | E2-MCF7 | GSE14664 | 107493203 | 107493271 | 68 | 3409 |
| H3K4me2 | HCT116 | GSE10453 | 107495550 | 107496203 | 653 | 769 |
| H3K4me3 | colorectal | cancer | 107495823 | 107496236 | 413 | 616 |
| Oct1 | Hela | GSE14283 | 107484168 | 107484200 | 32 | 12462 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 107592051 | 107592103 | 52 | 14813 |
| Oct1 | Hela | GSE14283 | 107591248 | 107591317 | 69 | 14018 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 107520609 | 107520947 | 338 | 0 |
| CTCF | CD4 | SISSRdata | 107520609 | 107520947 | 338 | 0 |
| ER | E2-MCF7 | GSE14664 | 107501448 | 107501489 | 41 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 107497288 | 107497791 | 503 | 0 |
| H3K4me3 | colorectal | cancer | 107497137 | 107497791 | 654 | 0 |
| H3ac | HepG2 | E | 107497324 | 107497977 | 653 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 107511060 | 107511087 | 27 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 107512789 | 107512821 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 107512785 | 107512861 | 76 | 0 |
| Oct1 | Hela | GSE14283 | 107542846 | 107542903 | 57 | 0 |
| PHF8 | 293T | GSE20725 | 107496301 | 107497190 | 889 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 107496503 | 107497600 | 1097 | 0 |
| TAF | k562 | GSE8489 | 107497246 | 107498068 | 822 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26864 | mRNA | TMEM38B | chr9 | 105536379 | 105616999 | 1863 | HTC | chr9 | 105550850 | 105552713 | Non-exonic Bidirectional (NOB) pairs | |