AutismKB 2.0

Annotation Detail for SBNO1


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Basic Information Top
Gene Symbol:SBNO1 ( FLJ10701,FLJ10833,FLJ14066,FLJ16176,FLJ35199,MOP3,Sno )
Gene Full Name: strawberry notch homolog 1 (Drosophila)
Band: 12q24.31
Quick LinksEntrez ID:55206; OMIM: NA; Uniprot ID:SBNO1_HUMAN; ENSEMBL ID: ENSG00000139697; HGNC ID: 22973
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
149N6-acetyllysine.
214Phosphoserine.
413N6-acetyllysine.
692Phosphoserine.
693Phosphoserine.
697Phosphoserine.
768Phosphoserine (By similarity).
794Phosphoserine.
815Phosphoserine.
1222N6-acetyllysine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018183
  • Location:chr12 122346408-122400940
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 122416135 122416508 373 15381
CTCF CD4SISSRdata 122416135 122416508 373 15381
CTCF HelaGSE12889 122416290 122416578 288 15494
CTCF G2GSE9613 122414759 122415209 450 14044
CTCF G2GSE9613 122415887 122416609 722 15308
ETS1 JurkatGSE17954 122413756 122416536 2780 14206
FOXA1 MCF7GSE15244 122414080 122414573 493 13386
H3K4me3 colorectalcancer 122413611 122414537 926 13134
H3ac HepG2E 122413611 122414573 962 13152
HIF1 HypoHepG2 122415209 122416043 834 14686
HIF1 NormHepG2 122415491 122416148 657 14879
Oct4 hESGSE17917 122415188 122415604 416 14456
PHF8 293TGSE20725 122414734 122416583 1849 14718
PHF8 HeLaGSE20725 122414681 122416535 1854 14668
RARA MCF7GSE15244 122413611 122414502 891 13116
RARG MCF7GSE15244 122413611 122414537 926 13134
RARG MCF7GSE15244 122415962 122416185 223 15133
Rb SenescentGSE19898 122415356 122415946 590 14711
TAF HelaGSE8489 122413611 122414537 926 13134
TAF k562GSE8489 122413611 122414573 962 13152
TFAP2C MCF7GSE21234 122415484 122416513 1029 15058
USF1 HepG2E 122413611 122414573 962 13152
USF1 HepG2E 122415491 122416573 1082 15092
USF2 HepG2E 122413611 122414573 962 13152
USF2 HepG2E 122415679 122416439 760 15119
hScc1 BcellGSE12603 122414026 122415162 1136 13654
hScc1 BcellGSE12603 122416148 122416609 461 15438
hScc1 CdLSGSE12603 122416112 122416609 497 15420
p130 SenescentGSE19898 122415421 122416083 662 14812
p130 shRbSenescentGSE19898 122415416 122416117 701 14826
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 DLD1GSE12801 122341564 122342112 548 4571
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
RUNX JurkatGSE17954 122351059 122351164 105 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
6759 EST chr12 122335606 122335901 155 mRNA SBNO1 chr12 122305334 122359868Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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