AutismKB 2.0

Annotation Detail for PPP2R2B


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Basic Information Top
Gene Symbol:PPP2R2B ( B55BETA,FLJ95686,MGC24888,PP2AB55BETA,PP2ABBETA,PP2APR55B,PP2APR55BETA,PR2AB55BETA,PR2ABBETA,PR2APR55BETA,PR52B,PR55-BETA,PR55BETA,SCA12 )
Gene Full Name: protein phosphatase 2, regulatory subunit B, beta
Band: 5q32
Quick LinksEntrez ID:5521; OMIM: 604325; Uniprot ID:2ABB_HUMAN; ENSEMBL ID: ENSG00000156475; HGNC ID: 9305
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
11N-linkedHMM predict
12N-linkedHMM predict
19Phosphoserine(CAMK2)HMM predict
33N-linkedHMM predict
70Phosphotyrosine(Syk)HMM predict
82Phosphotyrosine(Jak)HMM predict
163Phosphothreonine(MAPK)HMM predict
188Phosphotyrosine(Syk)HMM predict
188Phosphotyrosine(INSR)HMM predict
241O-linkedHMM predict
273N-linkedHMM predict
347N-linkedHMM predict
369Phosphothreonine(PKC)HMM predict
382Phosphoserine(CK1)HMM predict
405Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004576
  • Location:chr5 145949260-146238351
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 146167009 146167728 719 0
CBP T0-glioblastomaGSE21026 146220210 146220806 596 0
CBP T30-glioblastomaGSE21026 146091321 146092585 1264 0
CTCF G2GSE9613 145982252 145982435 183 0
CTCF G2GSE9613 145992652 145992832 180 0
CTCF G2GSE9613 146021898 146022150 252 0
CTCF G2GSE9613 146065944 146066659 715 0
CTCF G2GSE9613 146120136 146120312 176 0
CTCF G2GSE9613 146173396 146173768 372 0
FoxA1 MCF7MACSdata 146220378 146220574 196 0
Myc hESGSE17917 145984043 145984420 377 0
NRSF JurkatGSE13047 145983879 145984533 654 0
NRSF JurkatGSE13047 146005012 146005610 598 0
NRSF JurkatGSE13047 146184719 146185419 700 0
NRSF JurkatSISSRdata 146184794 146185239 445 0
NRSF mAbJurkat 145980537 145981870 1333 0
NRSF mAbJurkat 145982252 145985391 3139 0
NRSF mAbJurkat 145985949 145987645 1696 0
NRSF mAbJurkat 145988017 145989433 1416 0
NRSF mAbJurkat 145989872 145990725 853 0
NRSF mAbJurkat 146002831 146003197 366 0
NRSF mAbJurkat 146004248 146006530 2282 0
NRSF mAbJurkat 146006931 146008143 1212 0
NRSF mAbJurkat 146008403 146009151 748 0
NRSF mAbJurkat 146180137 146182923 2786 0
NRSF mAbJurkat 146183254 146184469 1215 0
NRSF mAbJurkat 146184792 146188589 3797 0
NRSF-mono JurkatQuESTdata 145983878 145984708 830 0
NRSF-mono JurkatQuESTdata 146005073 146005577 504 0
NRSF-mono JurkatQuESTdata 146184724 146185288 564 0
NRSF pAbJurkat 145979391 145979605 214 0
NRSF pAbJurkat 145984186 145985069 883 0
NRSF pAbJurkat 146180137 146181226 1089 0
NRSF pAbJurkat 146183415 146184469 1054 0
NRSF pAbJurkat 146184792 146185508 716 0
NRSF pAbJurkat 146185792 146186709 917 0
NRSF pAbJurkat 146186969 146187813 844 0
NRSF-poly JurkatQuESTdata 145983935 145984531 596 0
NRSF-poly JurkatQuESTdata 146005133 146005610 477 0
NRSF-poly JurkatQuESTdata 146007708 146007978 270 0
NRSF-poly JurkatQuESTdata 146184782 146185294 512 0
Nanog ESGSE20650 145969641 145969773 132 0
Nanog hESGSE18292 146091857 146092088 231 0
Nanog hESGSE18292 146176838 146177098 260 0
Nanog hESGSE18292 146199679 146200315 636 0
Nanog hESGSE18292 146211854 146212440 586 0
P300 T30-glioblastomaGSE21026 146091131 146092496 1365 0
P300 T30-glioblastomaGSE21026 146219925 146220999 1074 0
RUNX JurkatGSE17954 146190131 146190220 89 0
Stat6 IL-4-hr1GSE17850 145967641 145968145 504 0
hScc1 BcellGSE12603 146237989 146238685 696 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
21624 EST chr5 145922981 145976803 27544 mRNA PPP2R2B chr5 145949259 146238352 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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