Annotation Detail for CCDC25
Basic Information Top
| Gene Symbol: | CCDC25 ( FLJ10853 ) |
|---|---|
| Gene Full Name: | coiled-coil domain containing 25 |
| Band: | 8p21.1 |
| Quick Links | Entrez ID:55246; OMIM: NA; Uniprot ID:CCD25_HUMAN; ENSEMBL ID: ENSG00000147419; HGNC ID: 25591 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 23 | N6-acetyllysine. | |
| 187 | Phosphoserine (By similarity). | |
| 204 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 187 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 204 | Phosphoserine. | Swiss-Prot 53.0 |
| 204 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 9 | Phosphoserine(IKK) | HMM predict |
| 11 | N-linked | HMM predict |
| 24 | Phosphotyrosine(INSR) | HMM predict |
| 24 | Phosphotyrosine(Syk) | HMM predict |
| 121 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_018246
- Location:chr8 27646751-27686088
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 27685386 | 27688481 | 3095 | 845 |
| Oct1 | Hela | GSE14283 | 27686653 | 27686699 | 46 | 588 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 27640727 | 27640978 | 251 | 5899 |
| CTCF | CD4 | SISSRdata | 27640727 | 27640978 | 251 | 5899 |
| CTCF | G2 | GSE9613 | 27640651 | 27641198 | 547 | 5827 |
| CTCF | G2 | GSE9613 | 27643266 | 27643463 | 197 | 3387 |
| Myc | K562 | GSE19551 | 27640682 | 27640966 | 284 | 5928 |
| Oct1 | Hela | GSE14283 | 27640278 | 27640321 | 43 | 6452 |
| TFAP2C | MCF7 | GSE21234 | 27643269 | 27643609 | 340 | 3313 |
| hScc1 | Bcell | GSE12603 | 27640651 | 27641023 | 372 | 5915 |
| hScc1 | Bcell | GSE12603 | 27643685 | 27643893 | 208 | 2963 |
| hScc1 | CdLS | GSE12603 | 27640651 | 27641023 | 372 | 5915 |
| hScc1 | G2 | GSE9613 | 27640651 | 27641234 | 583 | 5809 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 27677326 | 27677660 | 334 | 0 |
| CTCF | CD4 | SISSRdata | 27677326 | 27677660 | 334 | 0 |
| CTCF | G2 | GSE9613 | 27674592 | 27674776 | 184 | 0 |
| CTCF | G2 | GSE9613 | 27677480 | 27677694 | 214 | 0 |
| CTCF | G2 | GSE9613 | 27685705 | 27686109 | 404 | 0 |
| E2F4 | G0 | GSE7516 | 27685777 | 27686172 | 395 | 0 |
| FOXA1 | MCF7 | GSE15244 | 27654275 | 27654621 | 346 | 0 |
| GABP | Hela | GSE8489 | 27685057 | 27685851 | 794 | 0 |
| GABP | k562 | GSE8489 | 27685057 | 27686172 | 1115 | 0 |
| H3K4me3 | colorectal | cancer | 27685057 | 27685705 | 648 | 0 |
| H3ac | HepG2 | E | 27685057 | 27685777 | 720 | 0 |
| LIN9 | G0 | GSE7516 | 27685666 | 27686172 | 506 | 0 |
| NRSF | pAb | Jurkat | 27674592 | 27674776 | 184 | 0 |
| PHF8 | 293T | GSE20725 | 27685498 | 27686334 | 836 | 0 |
| PHF8 | HeLa | GSE20725 | 27685515 | 27686529 | 1014 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 27685322 | 27686368 | 1046 | 0 |
| Pol2 | GM12878 | GSE19551 | 27685481 | 27686489 | 1008 | 0 |
| TAF | Hela | GSE8489 | 27685057 | 27685851 | 794 | 0 |
| p130 | Quiescent | GSE19898 | 27685764 | 27686279 | 515 | 0 |
| p130 | Senescent | GSE19898 | 27685546 | 27686461 | 915 | 0 |
| p130 | shRbQuiescent | GSE19898 | 27685405 | 27686459 | 1054 | 0 |
| p130 | shRbSenescent | GSE19898 | 27685479 | 27686462 | 983 | 0 |
| p130 | G0 | GSE7516 | 27685666 | 27686172 | 506 | 0 |
Validated miRNA targets