Annotation Detail for PPP2R5C
Basic Information Top
| Gene Symbol: | PPP2R5C ( B56G,MGC23064,PR61G ) |
|---|---|
| Gene Full Name: | protein phosphatase 2, regulatory subunit B', gamma |
| Band: | 14q32.31 |
| Quick Links | Entrez ID:5527; OMIM: 601645; Uniprot ID:2A5G_HUMAN; ENSEMBL ID: ENSG00000078304; HGNC ID: 9311 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 348 | Phosphotyrosine. | |
| 349 | Phosphotyrosine. | |
| 354 | Phosphotyrosine. | |
| 422 | Nuclear localization signal (Potential). | |
| 497 | Phosphoserine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 92 | Phosphotyrosine(EGFR) | HMM predict |
| 92 | Phosphotyrosine(SRC) | HMM predict |
| 112 | N-linked | HMM predict |
| 298 | Phosphoserine(IKK) | HMM predict |
| 383 | N-linked | HMM predict |
| 451 | O-linked | HMM predict |
| 497 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_002719
- Location:chr14 101345924-101463827
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Nanog | hES | GSE18292 | 101481233 | 101481679 | 446 | 17629 |
| P300 | T30-glioblastoma | GSE21026 | 101463815 | 101464330 | 515 | 245 |
| Sox2 | hES | GSE18292 | 101481232 | 101481563 | 331 | 17570 |
| USF1 | HepG2 | E | 101468800 | 101469042 | 242 | 5094 |
| hScc1 | Bcell | GSE12603 | 101468239 | 101468468 | 229 | 4526 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 101452185 | 101453371 | 1186 | 0 |
| KLF4 | hES | GSE17917 | 101454475 | 101454886 | 411 | 0 |
| Oct1 | Hela | GSE14283 | 101460197 | 101460226 | 29 | 0 |
| hScc1 | Bcell | GSE12603 | 101452847 | 101453304 | 457 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 18668040 |
| hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
| hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
| hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 1084 | Unknown | pSILAC | miR-16 | PPP2R5C | down 50-25% | 18668040 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000078304 | n_a | n_a | n_a | "lymphocyte, lymphoblast" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma, non-Hodgkin's" |
Cis-Nats regulation