AutismKB 2.0

Annotation Detail for PI4K2A


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Basic Information Top
Gene Symbol:PI4K2A ( DKFZp761G1923,PI4KII,PIK42A,RP11-548K23.6 )
Gene Full Name: phosphatidylinositol 4-kinase type 2 alpha
Band: 10q24.2
Quick LinksEntrez ID:55361; OMIM: 609763; Uniprot ID:P4K2A_HUMAN; ENSEMBL ID: ENSG00000155252,ENSG00000249967; HGNC ID: 30031
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
5Phosphoserine.
9Phosphoserine.
44Phosphoserine.
47Phosphoserine.
51Phosphoserine.
461Phosphoserine.
462Phosphoserine.
464Phosphoserine.
Location(AA) Modifications Resource
5Phosphoserine.Swiss-Prot 53.0
5PhosphoserinePhospho.ELM 6.0
9Phosphoserine.Swiss-Prot 53.0
9PhosphoserinePhospho.ELM 6.0
47Phosphoserine.Swiss-Prot 53.0
47PhosphoserinePhospho.ELM 6.0
51Phosphoserine.Swiss-Prot 53.0
51PhosphoserinePhospho.ELM 6.0
462PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
9Phosphoserine(CDK)HMM predict
9Phosphoserine(CDC2)HMM predict
44Phosphoserine(IKK)HMM predict
44O-linkedHMM predict
47Phosphoserine(ATM)HMM predict
47Phosphoserine(IKK)HMM predict
47O-linkedHMM predict
51O-linkedHMM predict
51PhosphoserineHMM predict
51Phosphoserine(ATM)HMM predict
222N-linkedHMM predict
377Phosphoserine(ATM)HMM predict
402Phosphotyrosine(SRC)HMM predict
429N-linkedHMM predict
437N-linkedHMM predict
461Phosphoserine(CK1)HMM predict
461Phosphoserine(PKA)HMM predict
464Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018425
  • Location:chr10 99390432-99426176
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 99389912 99390668 756 143
P300 T0-glioblastomaGSE21026 99390079 99390533 454 127
RARA MCF7GSE15244 99389938 99390273 335 327
p130 SenescentGSE19898 99390044 99390554 510 134
p130 shRbSenescentGSE19898 99390079 99390556 477 115
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 99426513 99426737 224 449
CTCF CD4SISSRdata 99426513 99426737 224 449
CTCF JurkatGSE12889 99426505 99426764 259 458
FoxA1 MCF7MACSdata 99426463 99426687 224 399
hScc1 BcellGSE12603 99426546 99426789 243 491
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 99398479 99399395 916 0
Fos K562GSE19551 99398585 99399286 701 0
FoxA1 MCF7MACSdata 99398803 99399076 273 0
H3ac HepG2E 99390987 99392111 1124 0
Nanog ESGSE20650 99398301 99398979 678 0
Nanog hESGSE18292 99398465 99398958 493 0
Oct1 HelaGSE14283 99393443 99393472 29 0
Oct4 hESGSE17917 99398402 99398681 279 0
Oct4 hESGSE21916 99398258 99398845 587 0
P300 T30-glioblastomaGSE21026 99398515 99399368 853 0
Rb QuiescentGSE19898 99403829 99403998 169 0
TFAP2C MCF7GSE21234 99401503 99401999 496 0
hScc1 BcellGSE12603 99390505 99390907 402 0
hScc1 G2GSE9613 99390485 99390945 460 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
3539 mRNA PI4KII chr10 99390432 99426177 260 EST chr10 99423155 99425438Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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