Annotation Detail for CHST12
Basic Information Top
| Gene Symbol: | CHST12 ( C4S-2,C4ST-2,C4ST2 ) |
|---|---|
| Gene Full Name: | carbohydrate (chondroitin 4) sulfotransferase 12 |
| Band: | 7p22.3 |
| Quick Links | Entrez ID:55501; OMIM: 610129; Uniprot ID:CHSTC_HUMAN; ENSEMBL ID: ENSG00000136213; HGNC ID: 17423 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 134 | N-linked (GlcNAc...) (Potential). | |
| 209 | N-linked (GlcNAc...) (Potential). | |
| 280 | N-linked (GlcNAc...) (Potential). | |
| 370 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 134 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 209 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 280 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 370 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 51 | O-linked | HMM predict |
| 51 | O-linked | HMM predict |
| 51 | Phosphothreonine(MAPK) | HMM predict |
| 96 | Phosphoserine(IKK) | HMM predict |
| 134 | N-linked | HMM predict |
| 209 | N-linked | HMM predict |
| 267 | Phosphotyrosine(EGFR) | HMM predict |
| 280 | N-linked | HMM predict |
| 370 | N-linked | HMM predict |
- RefSeq ID: NM_018641
- Location:chr7 2409784-2440739
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 2409315 | 2409578 | 263 | 338 |
| PHF8 | HeLa | GSE20725 | 2408885 | 2410511 | 1626 | 87 |
| TAF | Hela | GSE8489 | 2409315 | 2409578 | 263 | 338 |
| hScc1 | Bcell | GSE12603 | 2402490 | 2402797 | 307 | 7141 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 2457534 | 2457963 | 429 | 17009 |
| CTCF | CD4 | SISSRdata | 2457534 | 2457963 | 429 | 17009 |
| CTCF | G2 | GSE9613 | 2446408 | 2446727 | 319 | 5828 |
| CTCF | G2 | GSE9613 | 2450642 | 2450820 | 178 | 9992 |
| CTCF | G2 | GSE9613 | 2452124 | 2452464 | 340 | 11555 |
| CTCF | G2 | GSE9613 | 2453070 | 2453365 | 295 | 12478 |
| CTCF | G2 | GSE9613 | 2456487 | 2457105 | 618 | 16057 |
| CTCF | G2 | GSE9613 | 2457429 | 2458616 | 1187 | 17283 |
| ER | Breast-Cancer | GSE22609 | 2457783 | 2458564 | 781 | 17434 |
| ER | MCF7 | GSE19013 | 2443158 | 2444111 | 953 | 2895 |
| ER | MCF7 | GSE19013 | 2446710 | 2447548 | 838 | 6390 |
| FOXA1 | MCF7 | GSE15244 | 2446444 | 2447383 | 939 | 6174 |
| Oct4 | hES | GSE17917 | 2457428 | 2457987 | 559 | 16968 |
| RARA | MCF7 | GSE15244 | 2446466 | 2447556 | 1090 | 6272 |
| hScc1 | Bcell | GSE12603 | 2457429 | 2458167 | 738 | 17059 |
| hScc1 | G2 | GSE9613 | 2457429 | 2458021 | 592 | 16986 |
| p130 | Quiescent | GSE19898 | 2457706 | 2457875 | 169 | 17051 |
| p130 | Senescent | GSE19898 | 2457732 | 2458008 | 276 | 17131 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 2437738 | 2437987 | 249 | 0 |
| CTCF | CD4 | SISSRdata | 2437738 | 2437987 | 249 | 0 |
| CTCF | Hela | GSE12889 | 2437628 | 2438064 | 436 | 0 |
| CTCF | G2 | GSE9613 | 2409942 | 2410691 | 749 | 0 |
| CTCF | G2 | GSE9613 | 2416693 | 2417024 | 331 | 0 |
| CTCF | G2 | GSE9613 | 2438644 | 2439257 | 613 | 0 |
| CTCF | G2 | GSE9613 | 2439728 | 2439898 | 170 | 0 |
| FOXA1 | MCF7 | GSE15244 | 2417956 | 2419488 | 1532 | 0 |
| FoxA1 | MCF7 | MACSdata | 2418260 | 2418596 | 336 | 0 |
| H3K4me3 | colorectal | cancer | 2410925 | 2411298 | 373 | 0 |
| H3ac | HepG2 | E | 2410691 | 2411298 | 607 | 0 |
| H3ac | HepG2 | E | 2411601 | 2412472 | 871 | 0 |
| RARA | MCF7 | GSE15244 | 2431432 | 2432417 | 985 | 0 |
| TFAP2C | MCF7 | GSE21234 | 2431404 | 2431939 | 535 | 0 |
| hScc1 | Bcell | GSE12603 | 2439097 | 2439991 | 894 | 0 |
Validated miRNA targets