AutismKB 2.0

Annotation Detail for SRGN


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Basic Information Top
Gene Symbol:SRGN ( FLJ12930,MGC9289,PPG,PRG,PRG1 )
Gene Full Name: serglycin
Band: 10q22.1
Quick LinksEntrez ID:5552; OMIM: 177040; Uniprot ID:SRGN_HUMAN; ENSEMBL ID: ENSG00000122862; HGNC ID: 9361
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
94O-linked (Xyl...) (glycosaminoglycan).
96O-linked (Xyl...) (glycosaminoglycan).
100O-linked (Xyl...) (glycosaminoglycan)
102O-linked (Xyl...) (glycosaminoglycan)
104O-linked (Xyl...) (glycosaminoglycan)
106O-linked (Xyl...) (glycosaminoglycan)
108O-linked (Xyl...) (glycosaminoglycan)
110O-linked (Xyl...) (glycosaminoglycan)
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002727
  • Location:chr10 70517833-70534570
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog hESGSE18292 70498948 70499180 232 18770
TAF k562GSE8489 70515618 70516258 640 1896
hScc1 BcellGSE12603 70515340 70515796 456 2266
hScc1 CdLSGSE12603 70517335 70518114 779 109
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 70523117 70523389 272 0
CTCF CD4SISSRdata 70523117 70523389 272 0
GABP HelaGSE8489 70518553 70519302 749 0
GABP k562GSE8489 70517863 70519302 1439 0
Oct1 H2O2-HelaGSE14283 70531563 70531593 30 0
Oct1 HelaGSE14283 70531525 70531595 70 0
Pol2 GM12878GSE19551 70517335 70518480 1145 0
TAF k562GSE8489 70517335 70519302 1967 0
TAF k562GSE8489 70519732 70520089 357 0
TAF k562GSE8489 70520502 70521327 825 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-21 hsa-mir-21 17 19737943
hsa-miR-21 hsa-mir-21 17 19737943
hsa-miR-21* hsa-mir-21 17 19737943
hsa-miR-21* hsa-mir-21 17 19737943
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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