Annotation Detail for PRIM2
Basic Information Top
| Gene Symbol: | PRIM2 ( MGC75142,PRIM2A,p58 ) |
|---|---|
| Gene Full Name: | primase, DNA, polypeptide 2 (58kDa) |
| Band: | 6p11.2 |
| Quick Links | Entrez ID:5558; OMIM: 176636; Uniprot ID:PRI2_HUMAN; ENSEMBL ID: ENSG00000146143; HGNC ID: 9370 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 381 | Phosphotyrosine. | |
| 470 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 381 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 381 | Phosphotyrosine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 19 | N-linked | HMM predict |
| 21 | Phosphoserine(PKB) | HMM predict |
| 21 | Phosphoserine(PKA) | HMM predict |
| 93 | Phosphotyrosine(Syk) | HMM predict |
| 155 | Phosphoserine(CK2) | HMM predict |
| 172 | Phosphoserine(CK1) | HMM predict |
| 227 | Phosphoserine(PKG) | HMM predict |
| 257 | Sulfotyrosine | HMM predict |
| 287 | S-palmitoyl | HMM predict |
| 362 | Phosphotyrosine(INSR) | HMM predict |
| 377 | Phosphoserine(ATM) | HMM predict |
| 404 | Phosphoserine(CDC2) | HMM predict |
| 470 | Phosphothreonine(CDC2) | HMM predict |
| 470 | Phosphothreonine(MAPK) | HMM predict |
| 470 | O-linked | HMM predict |
| 489 | Phosphoserine(IKK) | HMM predict |
| 504 | Phosphotyrosine(INSR) | HMM predict |
- RefSeq ID: NM_000947
- Location:chr6 57290380-57621333
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 57289200 | 57289531 | 331 | 1015 |
| CTCF | CD4 | SISSRdata | 57289200 | 57289531 | 331 | 1015 |
| CTCF | G2 | GSE9613 | 57289277 | 57289784 | 507 | 850 |
| H3ac | HepG2 | E | 57289277 | 57291316 | 2039 | 84 |
| LIN9 | G0 | GSE7516 | 57289716 | 57290919 | 1203 | 63 |
| Nanog | hES | GSE18292 | 57289286 | 57289426 | 140 | 1025 |
| PHF8 | HeLa | GSE20725 | 57289789 | 57290874 | 1085 | 49 |
| TFAP2C | MCF7 | GSE21234 | 57289986 | 57290518 | 532 | 129 |
| hScc1 | Bcell | GSE12603 | 57289277 | 57289971 | 694 | 757 |
| hScc1 | CdLS | GSE12603 | 57289277 | 57289971 | 694 | 757 |
| hScc1 | G2 | GSE9613 | 57289277 | 57289652 | 375 | 916 |
| p130 | Quiescent | GSE19898 | 57290084 | 57290538 | 454 | 70 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 57297457 | 57297625 | 168 | 0 |
| CTCF | CD4 | GSE12889 | 57445603 | 57445808 | 205 | 0 |
| CTCF | CD4 | SISSRdata | 57297457 | 57297625 | 168 | 0 |
| CTCF | CD4 | SISSRdata | 57445603 | 57445808 | 205 | 0 |
| CTCF | G2 | GSE9613 | 57295492 | 57295674 | 182 | 0 |
| CTCF | G2 | GSE9613 | 57504627 | 57504766 | 139 | 0 |
| CTCF | G2 | GSE9613 | 57520104 | 57520650 | 546 | 0 |
| E2F4 | G0 | GSE7516 | 57290004 | 57290812 | 808 | 0 |
| ER | E2-MCF7 | GSE14664 | 57445204 | 57445282 | 78 | 0 |
| FOXA1 | MCF7 | GSE15244 | 57344445 | 57345295 | 850 | 0 |
| GABP | k562 | GSE8489 | 57289971 | 57293248 | 3277 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 57290587 | 57291192 | 605 | 0 |
| H3K4me3 | colorectal | cancer | 57290625 | 57290986 | 361 | 0 |
| H3ac | HepG2 | E | 57291876 | 57292612 | 736 | 0 |
| LIN9 | S | GSE7516 | 57289971 | 57291015 | 1044 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 57324558 | 57324586 | 28 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 57441888 | 57441924 | 36 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 57459250 | 57459315 | 65 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 57596558 | 57596584 | 26 | 0 |
| Oct1 | Hela | GSE14283 | 57348987 | 57349013 | 26 | 0 |
| Oct1 | Hela | GSE14283 | 57427548 | 57427596 | 48 | 0 |
| Oct1 | Hela | GSE14283 | 57432410 | 57432478 | 68 | 0 |
| Oct1 | Hela | GSE14283 | 57441886 | 57441924 | 38 | 0 |
| Oct1 | Hela | GSE14283 | 57486254 | 57486286 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 57488874 | 57488951 | 77 | 0 |
| Oct1 | Hela | GSE14283 | 57507776 | 57507803 | 27 | 0 |
| Oct1 | Hela | GSE14283 | 57534305 | 57534338 | 33 | 0 |
| Oct1 | Hela | GSE14283 | 57596543 | 57596595 | 52 | 0 |
| RARA | MCF7 | GSE15244 | 57344626 | 57345015 | 389 | 0 |
| Rb | Quiescent | GSE19898 | 57290173 | 57290668 | 495 | 0 |
| Rb | Senescent | GSE19898 | 57290134 | 57290747 | 613 | 0 |
| TAF | k562 | GSE8489 | 57290444 | 57292430 | 1986 | 0 |
| hScc1 | G2 | GSE9613 | 57553530 | 57553668 | 138 | 0 |
| p130 | Quiescent | GSE19898 | 57362712 | 57362919 | 207 | 0 |
| p130 | Senescent | GSE19898 | 57290061 | 57290730 | 669 | 0 |
| p130 | shRbQuiescent | GSE19898 | 57290001 | 57290772 | 771 | 0 |
| p130 | shRbSenescent | GSE19898 | 57290143 | 57290847 | 704 | 0 |
| p130 | G0 | GSE7516 | 57290076 | 57290919 | 843 | 0 |
| p130 | S | GSE7516 | 57290179 | 57290883 | 704 | 0 |
Validated miRNA targets