AutismKB 2.0

Annotation Detail for DDX27


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Basic Information Top
Gene Symbol:DDX27 ( DKFZp667N057,DRS1,FLJ12917,FLJ20596,FLJ22238,MGC1018,MGC163147,PP3241,RHLP,Rrp3p,dJ686N3.1 )
Gene Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Band: 20q13.13
Quick LinksEntrez ID:55661; OMIM: NA; Uniprot ID:DDX27_HUMAN; ENSEMBL ID: ENSG00000124228; HGNC ID: 15837
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
54Phosphoserine (By similarity).
56Phosphoserine (By similarity).
79Phosphoserine.
166Phosphoserine.
171Phosphoserine.
175Phosphotyrosine.
176Phosphoserine.
177Phosphoserine.
200Nuclear localization signal (Potential).
246Q motif.
374DEAD box.
Location(AA) Modifications Resource
54Phosphoserine (By similarity).Swiss-Prot 53.0
56Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
54Phosphoserine(CK2)HMM predict
56Phosphoserine(CK2)HMM predict
116Phosphothreonine(PKC)HMM predict
130Phosphothreonine(PKC)HMM predict
130Phosphothreonine(CK2)HMM predict
130Phosphothreonine(PKA)HMM predict
166Phosphoserine(CK1)HMM predict
166Phosphoserine(CK2)HMM predict
171Phosphoserine(CK1)HMM predict
175Phosphotyrosine(INSR)HMM predict
175Phosphotyrosine(SRC)HMM predict
175Phosphotyrosine(Jak)HMM predict
175Phosphotyrosine(Syk)HMM predict
177Phosphoserine(CK2)HMM predict
212Phosphoserine(ATM)HMM predict
282Phosphotyrosine(Jak)HMM predict
317N-linkedHMM predict
398Phosphothreonine(PKA)HMM predict
496N-linkedHMM predict
537N-linkedHMM predict
542N-linkedHMM predict
611Phosphotyrosine(Jak)HMM predict
611Phosphotyrosine(Syk)HMM predict
700Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017895
  • Location:chr20 47269290-47294018
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 47267127 47267408 281 2023
CTCF CD4SISSRdata 47267127 47267408 281 2023
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP k562GSE8489 47269094 47270882 1788 0
H3K4me2 HCT116GSE10453 47269902 47270882 980 0
H3K4me3 colorectalcancer 47269640 47270274 634 0
H3ac HepG2E 47269165 47270882 1717 0
Myc K562GSE19551 47269031 47269714 683 0
P300 T30-glioblastomaGSE21026 47268835 47269924 1089 0
TAF HelaGSE8489 47269094 47270882 1788 0
TFAP2C MCF7GSE21234 47280641 47281250 609 0
hScc1 BcellGSE12603 47269196 47269754 558 0
hScc1 BcellGSE12603 47275918 47276105 187 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
16491 mRNA DDX27 chr20 47269290 47294019 203 HTC chr20 47287892 47328089Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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