AutismKB 2.0

Annotation Detail for DENND4C


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Basic Information Top
Gene Symbol:DENND4C ( C9orf55,C9orf55B,DKFZp686I09113,FLJ20686,bA513M16.3 )
Gene Full Name: DENN/MADD domain containing 4C
Band: 9p22.1
Quick LinksEntrez ID:55667; OMIM: NA; Uniprot ID:DEN4C_HUMAN; ENSEMBL ID: ENSG00000137145; HGNC ID: 26079
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
505Phosphoserine.
729Phosphoserine.
732Phosphoserine.
737Phosphoserine.
753Phosphoserine.
765Phosphothreonine.
767Phosphoserine.
810Phosphoserine.
829N-linked (GlcNAc...) (Potential).
863Phosphoserine.
866N-linked (GlcNAc...) (Potential).
890Phosphoserine.
930N-linked (GlcNAc...) (Potential).
989Phosphoserine.
1008Phosphoserine.
1042Phosphoserine.
1089Phosphoserine.
1110Phosphoserine.
1179N-linked (GlcNAc...) (Potential).
1194N-linked (GlcNAc...) (Potential).
1237N-linked (GlcNAc...) (Potential).
1317Phosphoserine.
1320Phosphoserine.
1330N-linked (GlcNAc...) (Potential).
1387Phosphoserine.
1391Phosphoserine.
1396N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
679PhosphoserinePhospho.ELM 6.0
712PhosphothreoninePhospho.ELM 6.0
714PhosphoserinePhospho.ELM 6.0
776N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
810Phosphoserine.Swiss-Prot 53.0
813N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
877N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1036Phosphoserine.Swiss-Prot 53.0
1126N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1141N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1184N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1277N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1343N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
17Phosphoserine(IKK)HMM predict
49Phosphoserine(ATM)HMM predict
71Phosphoserine(CDC2)HMM predict
90Phosphoserine(ATM)HMM predict
94Phosphoserine(IKK)HMM predict
95O-linkedHMM predict
95Phosphothreonine(CDK)HMM predict
166Phosphoserine(MAPK)HMM predict
323Phosphotyrosine(EGFR)HMM predict
391Phosphoserine(ATM)HMM predict
616Phosphoserine(IKK)HMM predict
630Phosphotyrosine(INSR)HMM predict
632Phosphoserine(CK2)HMM predict
676Phosphoserine(IKK)HMM predict
676Phosphoserine(ATM)HMM predict
679O-linkedHMM predict
684Phosphoserine(MAPK)HMM predict
684Phosphoserine(IKK)HMM predict
684Phosphoserine(CDC2)HMM predict
710Phosphoserine(CK1)HMM predict
714Phosphoserine(IKK)HMM predict
775O-linkedHMM predict
776N-linkedHMM predict
810Phosphoserine(IKK)HMM predict
813N-linkedHMM predict
837Phosphoserine(MAPK)HMM predict
837Phosphoserine(CDC2)HMM predict
846Phosphoserine(ATM)HMM predict
861O-linkedHMM predict
872Phosphoserine(CK1)HMM predict
895Phosphoserine(CK1)HMM predict
927Phosphothreonine(MAPK)HMM predict
936Phosphoserine(CDC2)HMM predict
936Phosphoserine(CDK)HMM predict
950Phosphotyrosine(INSR)HMM predict
989Phosphoserine(CK1)HMM predict
989Phosphoserine(PKG)HMM predict
989Phosphoserine(PKA)HMM predict
1004Phosphoserine(CK2)HMM predict
1007Phosphoserine(CK1)HMM predict
1008Phosphoserine(CDC2)HMM predict
1012O-linkedHMM predict
1018Phosphothreonine(PKC)HMM predict
1025Phosphothreonine(MAPK)HMM predict
1027Phosphoserine(MAPK)HMM predict
1029Phosphothreonine(CDK)HMM predict
1036Phosphoserine(IKK)HMM predict
1036Phosphoserine(CK1)HMM predict
1044Phosphoserine(CDK)HMM predict
1044Phosphoserine(CDC2)HMM predict
1098PhosphoserineHMM predict
1098Phosphoserine(CK2)HMM predict
1098Phosphoserine(ATM)HMM predict
1098Phosphoserine(CK2)HMM predict
1124Phosphoserine(ATM)HMM predict
1126N-linkedHMM predict
1130O-linkedHMM predict
1140Phosphoserine(IKK)HMM predict
1142O-linkedHMM predict
1143O-linkedHMM predict
1143Phosphoserine(CK1)HMM predict
1150Phosphoserine(CK1)HMM predict
1150Phosphoserine(ATM)HMM predict
1177Phosphoserine(CK2)HMM predict
1182Phosphoserine(ATM)HMM predict
1184N-linkedHMM predict
1185O-linkedHMM predict
1201Phosphoserine(IKK)HMM predict
1227Phosphoserine(IKK)HMM predict
1312Phosphoserine(IKK)HMM predict
1329Phosphothreonine(PKC)HMM predict
1333Phosphoserine(PKG)HMM predict
1343N-linkedHMM predict
1347Phosphothreonine(PKC)HMM predict
1351Phosphoserine(CAMK2)HMM predict
1351Phosphoserine(IKK)HMM predict
1373Phosphoserine(IKK)HMM predict
1400Phosphoserine(MAPK)HMM predict
1471Phosphoserine(ATM)HMM predict
1513Phosphoserine(CK1)HMM predict
1611S-palmitoylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_017925
  • Location:chr9 19280748-19364137
  • strand:+
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Pol2 GM12878GSE19551 19364444 19364924 480 547
PolII HeLaGSE12783 19361831 19367646 5815 601
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 19339947 19339979 32 0
ER Fulvestrant-MCF7GSE14664 19339933 19339978 45 0
Oct1 H2O2-HelaGSE14283 19325830 19325915 85 0
Oct1 HelaGSE14283 19325830 19325920 90 0
TFAP2C MCF7GSE21234 19358971 19359443 472 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
26244 HTC C9orf55 chr9 19330963 19364137 450 EST chr9 19363642 19364092Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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