AutismKB 2.0

Annotation Detail for CCDC94


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:CCDC94 ( FLJ10374 )
Gene Full Name: coiled-coil domain containing 94
Band: 19p13.3
Quick LinksEntrez ID:55702; OMIM: NA; Uniprot ID:CCD94_HUMAN; ENSEMBL ID: ENSG00000105248; HGNC ID: 25518
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
211Phosphoserine.
213Phosphoserine.
220Phosphoserine.
Location(AA) Modifications Resource
211Phosphoserine.Swiss-Prot 53.0
211PhosphoserinePhospho.ELM 6.0
213Phosphoserine.Swiss-Prot 53.0
213PhosphoserinePhospho.ELM 6.0
313PhosphotyrosinePhospho.ELM 6.0
316PhosphoserinePhospho.ELM 6.0
319PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
98SulfotyrosineHMM predict
139N-linkedHMM predict
144Phosphoserine(PKG)HMM predict
179Phosphoserine(CK2)HMM predict
179Phosphoserine(CK1)HMM predict
211Phosphoserine(CK1)HMM predict
211Phosphoserine(CK2)HMM predict
213Phosphoserine(CK1)HMM predict
213Phosphoserine(CK2)HMM predict
220PhosphoserineHMM predict
220Phosphoserine(IKK)HMM predict
220Phosphoserine(CDK)HMM predict
220Phosphoserine(CDC2)HMM predict
229N-linkedHMM predict
256Phosphoserine(PKA)HMM predict
285Phosphothreonine(MAPK)HMM predict
296N-linkedHMM predict
301Phosphothreonine(MAPK)HMM predict
308Phosphoserine(ATM)HMM predict
308Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018074
  • Location:chr19 4198107-4220082
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 4197782 4197995 213 219
CTCF CD4SISSRdata 4197782 4197995 213 219
CTCF G2GSE9613 4197544 4198202 658 235
ETS1 JurkatGSE17954 4197477 4198569 1092 85
FOXA1 MCF7GSE15244 4197808 4198275 467 66
GABP HelaGSE8489 4197481 4198346 865 194
GABP k562GSE8489 4197481 4198413 932 161
LIN9 SGSE7516 4197808 4198275 467 66
Myc K562GSE19551 4197468 4198663 1195 42
P300 T0-glioblastomaGSE21026 4197519 4198449 930 124
PHF8 Hs68plusFBSGSE20725 4197399 4198721 1322 48
RARA MCF7GSE15244 4197544 4198275 731 198
TAF HelaGSE8489 4197733 4198451 718 16
TAF k562GSE8489 4197733 4198202 469 140
hScc1 BcellGSE12603 4197733 4198021 288 231
p130 QuiescentGSE19898 4197469 4197756 287 495
p130 QuiescentGSE19898 4197795 4198056 261 182
p130 SenescentGSE19898 4197423 4198538 1115 127
p130 shRbSenescentGSE19898 4197485 4198545 1060 93
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 4224010 4224184 174 4015
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 4217986 4218911 925 0
Fos K562GSE19551 4197380 4198834 1454 0
Fos K562GSE19551 4214747 4214968 221 0
Gata2 K562GSE18868 4198095 4199089 994 0
Jun K562GSE19551 4214766 4214988 222 0
Oct1 H2O2-HelaGSE14283 4211280 4211310 30 0
Oct1 H2O2-HelaGSE14283 4219357 4219388 31 0
Oct1 HelaGSE14283 4203209 4203294 85 0
Oct1 HelaGSE14283 4211280 4211310 30 0
Oct1 HelaGSE14283 4212311 4212348 37 0
Oct1 HelaGSE14283 4219319 4219389 70 0
P300 T30-glioblastomaGSE21026 4197559 4198823 1264 0
Rb QuiescentGSE19898 4198255 4198480 225 0
Rb SenescentGSE19898 4218017 4218356 339 0
USF1 HepG2E 4197808 4198524 716 0
USF2 HepG2E 4197840 4198451 611 0
VDR GM10861-stimGSE22484 4217781 4219308 1527 0
hScc1 BcellGSE12603 4217250 4217624 374 0
hScc1 BcellGSE12603 4217986 4218911 925 0
hScc1 CdLSGSE12603 4217986 4218911 925 0
hScc1 G2GSE9613 4217986 4218911 925 0
p130 QuiescentGSE19898 4198322 4198520 198 0
p130 shRbQuiescentGSE19898 4197685 4198557 872 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12520 mRNA FLJ10374 chr19 4198107 4220083 60 mRNA chr19 4197335 4198355Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved