AutismKB 2.0

Annotation Detail for NECAP2


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Basic Information Top
Gene Symbol:NECAP2 ( FLJ10420 )
Gene Full Name: NECAP endocytosis associated 2
Band: 1p36.13
Quick LinksEntrez ID:55707; OMIM: 611624; Uniprot ID:NECP2_HUMAN; ENSEMBL ID: ENSG00000157191; HGNC ID: 25528
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
243WXXF motif 1.
263WXXF motif 2.
Location(AA) Modifications Resource
Location(AA) Modification Resource
6Phosphotyrosine(Syk)HMM predict
6Phosphotyrosine(SRC)HMM predict
6Phosphotyrosine(EGFR)HMM predict
186O-linkedHMM predict
197O-linkedHMM predict
221O-linkedHMM predict
222O-linkedHMM predict
222O-linkedHMM predict
247Phosphothreonine(PKA)HMM predict
249Phosphoserine(IKK)HMM predict
249O-linkedHMM predict
249Phosphoserine(CK1)HMM predict
250O-linkedHMM predict
252O-linkedHMM predict
252Phosphoserine(ATM)HMM predict
252Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018090
  • Location:chr1 16639819-16659158
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 16639611 16639874 263 77
CTCF CD4SISSRdata 16639611 16639874 263 77
CTCF HelaGSE12889 16639612 16639855 243 86
CTCF JurkatGSE12889 16639588 16639892 304 80
CTCF G2GSE9613 16639486 16639924 438 115
Myc K562GSE19551 16639253 16640158 905 114
P300 T0-glioblastomaGSE21026 16639367 16640056 689 108
PHF8 HeLaGSE20725 16639284 16640275 991 40
TAFII hESGSE17917 16639397 16639974 577 134
hScc1 BcellGSE12603 16639596 16639924 328 60
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 16673321 16673611 290 14308
CTCF G2GSE9613 16674837 16675201 364 15861
CTCF G2GSE9613 16677398 16677539 141 18310
Oct1 HelaGSE14283 16674561 16674589 28 15417
hScc1 BcellGSE12603 16673290 16673611 321 14292
hScc1 BcellGSE12603 16674837 16675164 327 15842
hScc1 BcellGSE12603 16677462 16678006 544 18576
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 16639289 16640842 1553 0
H3K4me3 colorectalcancer 16640204 16641036 832 0
H3ac HepG2E 16639958 16641036 1078 0
H3ac HepG2E 16641369 16641655 286 0
LIN9 SGSE7516 16639635 16640115 480 0
NFkBII GM12892GSE19485 16648879 16651706 2827 0
P300 T30-glioblastomaGSE21026 16639262 16640654 1392 0
PHF8 293TGSE20725 16639269 16640590 1321 0
PHF8 Hs68plusFBSGSE20725 16639446 16640461 1015 0
TAF k562GSE8489 16641369 16641697 328 0
hScc1 CdLSGSE12603 16639557 16640150 593 0
p130 shRbQuiescentGSE19898 16639679 16640342 663 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 15685193
hsa-miR-1 hsa-mir-1-1 20 15685193
hsa-miR-124 hsa-mir-124-1 8 15685193
hsa-miR-124 hsa-mir-124-2 8 15685193
hsa-miR-124 hsa-mir-124-3 20 15685193
hsa-miR-373 hsa-mir-373 19 15685193
hsa-miR-373* hsa-mir-373 19 15685193
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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