AutismKB 2.0

Annotation Detail for POLR3E


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Basic Information Top
Gene Symbol:POLR3E ( RPC5,SIN )
Gene Full Name: polymerase (RNA) III (DNA directed) polypeptide E (80kD)
Band: 16p12.2
Quick LinksEntrez ID:55718; OMIM: NA; Uniprot ID:RPC5_HUMAN; ENSEMBL ID: ENSG00000058600; HGNC ID: 30347
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
161Phosphoserine.
162Phosphoserine.
224Phosphotyrosine.
503Phosphoserine.
522Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
38Phosphothreonine(PKC)HMM predict
39Phosphotyrosine(Syk)HMM predict
90O-linkedHMM predict
90Phosphoserine(CK1)HMM predict
109Phosphoserine(IKK)HMM predict
109O-linkedHMM predict
111O-linkedHMM predict
162Phosphoserine(ATM)HMM predict
162Phosphoserine(CK2)HMM predict
162PhosphoserineHMM predict
174Phosphothreonine(PKC)HMM predict
182Phosphoserine(CK2)HMM predict
245Phosphotyrosine(Syk)HMM predict
253Phosphoserine(ATM)HMM predict
338Phosphoserine(CK1)HMM predict
339Phosphoserine(ATM)HMM predict
503Phosphoserine(CK2)HMM predict
503Phosphoserine(CK2)HMM predict
556Phosphothreonine(CDC2)HMM predict
556Phosphothreonine(CDK)HMM predict
591PhosphoserineHMM predict
630Phosphoserine(MAPK)HMM predict
630Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018119
  • Location:chr16 22216241-22252841
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 22215915 22216290 375 139
CTCF CD4SISSRdata 22215915 22216290 375 139
ER MCF7GSE19013 22215052 22215628 576 902
H3ac HepG2E 22215424 22215821 397 619
Pol3 GM12878GSE19551 22215586 22216504 918 197
USF1 HepG2E 22215424 22215880 456 590
hScc1 CdLSGSE12603 22215821 22216426 605 118
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 22257512 22257558 46 4694
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 22219376 22219572 196 0
CTCF CD4GSE12889 22239901 22240427 526 0
CTCF CD4SISSRdata 22219376 22219572 196 0
CTCF CD4SISSRdata 22239901 22240427 526 0
CTCF G2GSE9613 22215844 22216827 983 0
CTCF G2GSE9613 22219158 22219653 495 0
CTCF G2GSE9613 22232182 22232962 780 0
CTCF G2GSE9613 22237455 22237753 298 0
CTCF G2GSE9613 22239844 22240598 754 0
CTCF G2GSE9613 22240847 22241016 169 0
CTCF G2GSE9613 22244545 22244883 338 0
ER MCF7GSE19013 22216387 22216879 492 0
FOXA1 MCF7GSE15244 22216540 22217238 698 0
H3ac HepG2E 22216827 22217238 411 0
H3ac HepG2E 22217803 22218201 398 0
Myc K562GSE19551 22240005 22240565 560 0
Myc hESGSE17917 22240287 22240692 405 0
PHF8 HeLaGSE20725 22215638 22217182 1544 0
PHF8 Hs68minusFBSGSE20725 22215410 22217671 2261 0
PHF8 Hs68plusFBSGSE20725 22215495 22217923 2428 0
Pol3 GM12878GSE19551 22217008 22217823 815 0
TFAP2C MCF7GSE21234 22219229 22219635 406 0
TFAP2C MCF7GSE21234 22240131 22240563 432 0
VDR GM10861-UnstimGSE22484 22214953 22218049 3096 0
VDR GM10861-stimGSE22484 22215248 22218110 2862 0
hScc1 BcellGSE12603 22215844 22216754 910 0
hScc1 BcellGSE12603 22219192 22219653 461 0
hScc1 BcellGSE12603 22235896 22236235 339 0
hScc1 BcellGSE12603 22237455 22237753 298 0
hScc1 BcellGSE12603 22239844 22240696 852 0
hScc1 CdLSGSE12603 22237526 22237753 227 0
hScc1 CdLSGSE12603 22239844 22240980 1136 0
hScc1 G2GSE9613 22239844 22240598 754 0
p63 keratinocytesGSE17611 22233330 22234443 1113 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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