Annotation Detail for CARKD
Basic Information Top
| Gene Symbol: | CARKD ( FLJ10769,FLJ34548,FLJ52550,LP3298 ) |
|---|---|
| Gene Full Name: | carbohydrate kinase domain containing |
| Band: | 13q34 |
| Quick Links | Entrez ID:55739; OMIM: NA; Uniprot ID:CARKD_HUMAN; ENSEMBL ID: ENSG00000213995; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 85 | Phosphotyrosine. | |
| 240 | N-linked (GlcNAc...). | |
| 297 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|
| No data |
- RefSeq ID: NM_018210
- Location:chr13 110066008-110090340
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | Jurkat | GSE12889 | 110060341 | 110060431 | 90 | 5623 |
| ETS1 | Jurkat | GSE17954 | 110065539 | 110066272 | 733 | 103 |
| Fos | K562 | GSE19551 | 110065470 | 110066083 | 613 | 232 |
| Gata1 | K562 | GSE18868 | 110052605 | 110052869 | 264 | 13272 |
| Gata2 | K562 | GSE18868 | 110052472 | 110053018 | 546 | 13264 |
| Oct1 | Hela | GSE14283 | 110046132 | 110046165 | 33 | 19860 |
| PHF8 | 293T | GSE20725 | 110065366 | 110066306 | 940 | 173 |
| TFAP2C | MCF7 | GSE21234 | 110050467 | 110051229 | 762 | 15161 |
| p130 | shRbQuiescent | GSE19898 | 110065434 | 110066127 | 693 | 228 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 110066014 | 110066439 | 425 | 0 |
| FoxA1 | MCF7 | MACSdata | 110076050 | 110076240 | 190 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 110076988 | 110077015 | 27 | 0 |
| PHF8 | HeLa | GSE20725 | 110065273 | 110066924 | 1651 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 110065277 | 110067169 | 1892 | 0 |
| TFAP2C | MCF7 | GSE21234 | 110066715 | 110067014 | 299 | 0 |
| TFAP2C | MCF7 | GSE21234 | 110087233 | 110087538 | 305 | 0 |
| hScc1 | Bcell | GSE12603 | 110088271 | 110088787 | 516 | 0 |
| hScc1 | CdLS | GSE12603 | 110068537 | 110068991 | 454 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7515 | mRNA | FLJ10769 | chr13 | 110066008 | 110090341 | 114 | mRNA | chr13 | 110064242 | 110066701 | Sense/Antisense (SA) pairs | |