Annotation Detail for RNF130
Basic Information Top
| Gene Symbol: | RNF130 ( G1RZFP,GOLIATH,GP,MGC117241,MGC138647,MGC99542 ) |
|---|---|
| Gene Full Name: | ring finger protein 130 |
| Band: | 5q35.3 |
| Quick Links | Entrez ID:55819; OMIM: NA; Uniprot ID:GOLI_HUMAN; ENSEMBL ID: ENSG00000113269; HGNC ID: 18280 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 29 | N-linked (GlcNAc...) (Potential). | |
| 40 | N-linked (GlcNAc...). | |
| 112 | N-linked (GlcNAc...) (Potential). | |
| 135 | N-linked (GlcNAc...) (Potential). | |
| 172 | N-linked (GlcNAc...) (Potential). | |
| 189 | N-linked (GlcNAc...) (Potential). | |
| 341 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 29 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 40 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 112 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 135 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 172 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 189 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 29 | N-linked | HMM predict |
| 34 | Phosphotyrosine(Jak) | HMM predict |
| 34 | Phosphotyrosine(Syk) | HMM predict |
| 40 | N-linked | HMM predict |
| 135 | N-linked | HMM predict |
| 145 | Phosphothreonine(CDK) | HMM predict |
| 282 | S-palmitoyl | HMM predict |
| 372 | Phosphothreonine(MAPK) | HMM predict |
| 404 | Isoleucine | HMM predict |
- RefSeq ID: NM_018434
- Location:chr5 179315079-179431714
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 179439314 | 179439972 | 658 | 7929 |
| FOXA1 | MCF7 | GSE15244 | 179444329 | 179445165 | 836 | 13033 |
| FoxA1 | MCF7 | MACSdata | 179444861 | 179445103 | 242 | 13268 |
| Nanog | hES | GSE18292 | 179442828 | 179443102 | 274 | 11251 |
| Oct4 | hES | GSE21916 | 179442343 | 179443679 | 1336 | 11297 |
| Sox2 | hES | GSE18292 | 179442781 | 179443062 | 281 | 11207 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 179334904 | 179335069 | 165 | 0 |
| CTCF | CD4 | SISSRdata | 179334904 | 179335069 | 165 | 0 |
| CTCF | G2 | GSE9613 | 179331888 | 179332218 | 330 | 0 |
| CTCF | G2 | GSE9613 | 179333004 | 179333386 | 382 | 0 |
| CTCF | G2 | GSE9613 | 179334022 | 179335449 | 1427 | 0 |
| CTCF | G2 | GSE9613 | 179387066 | 179387447 | 381 | 0 |
| CTCF | G2 | GSE9613 | 179430733 | 179431901 | 1168 | 0 |
| FoxA1 | MCF7 | MACSdata | 179428402 | 179428573 | 171 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 179429340 | 179429793 | 453 | 0 |
| H3K4me3 | colorectal | cancer | 179429857 | 179430565 | 708 | 0 |
| NRSF | mAb | Jurkat | 179411149 | 179411498 | 349 | 0 |
| Oct4 | ES | GSE20650 | 179327713 | 179327804 | 91 | 0 |
| PHF8 | 293T | GSE20725 | 179430931 | 179432161 | 1230 | 0 |
| PHF8 | HeLa | GSE20725 | 179430590 | 179432131 | 1541 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 179430507 | 179432071 | 1564 | 0 |
| USF1 | HepG2 | E | 179429163 | 179430500 | 1337 | 0 |
| hScc1 | Bcell | GSE12603 | 179334740 | 179335299 | 559 | 0 |
| hScc1 | CdLS | GSE12603 | 179334415 | 179335263 | 848 | 0 |
| p63 | keratinocytes | GSE17611 | 179416062 | 179416886 | 824 | 0 |
Validated miRNA targets