Annotation Detail for ALG1
Basic Information Top
| Gene Symbol: | ALG1 ( CDG1K,HMAT1,HMT-1,HMT1 ) |
|---|---|
| Gene Full Name: | asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae) |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:56052; OMIM: 605907; Uniprot ID:ALG1_HUMAN; ENSEMBL ID: ENSG00000033011; HGNC ID: 18294 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 242 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 148 | S-palmitoyl | HMM predict |
| 248 | Phosphoserine(PKG) | HMM predict |
| 385 | S-palmitoyl | HMM predict |
| 386 | S-palmitoyl | HMM predict |
| 457 | Valine | HMM predict |
- RefSeq ID: NM_019109
- Location:chr16 5061820-5075587
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| USF1 | HepG2 | E | 5060017 | 5060775 | 758 | 1425 |
| p130 | shRbSenescent | GSE19898 | 5061567 | 5061985 | 418 | 45 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 5074917 | 5075180 | 263 | 0 |
| CTCF | CD4 | SISSRdata | 5074917 | 5075180 | 263 | 0 |
| CTCF | Jurkat | GSE12889 | 5074894 | 5075097 | 203 | 0 |
| CTCF | G2 | GSE9613 | 5073765 | 5075669 | 1904 | 0 |
| FOXA1 | MCF7 | GSE15244 | 5074070 | 5076029 | 1959 | 0 |
| H3ac | HepG2 | E | 5061547 | 5063424 | 1877 | 0 |
| NFkBII | GM12892 | GSE19485 | 5061034 | 5062949 | 1915 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 5061250 | 5062398 | 1148 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 5061449 | 5062537 | 1088 | 0 |
| PHF8 | HeLa | GSE20725 | 5061549 | 5062445 | 896 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 5061531 | 5062609 | 1078 | 0 |
| TAF | Hela | GSE8489 | 5062074 | 5062423 | 349 | 0 |
| TAF | Hela | GSE8489 | 5065221 | 5065516 | 295 | 0 |
| TAFII | hES | GSE17917 | 5061654 | 5062179 | 525 | 0 |
| USF1 | HepG2 | E | 5061547 | 5063424 | 1877 | 0 |
| USF1 | HepG2 | E | 5065221 | 5065437 | 216 | 0 |
| USF2 | HepG2 | E | 5061547 | 5063424 | 1877 | 0 |
| hScc1 | Bcell | GSE12603 | 5073241 | 5076029 | 2788 | 0 |
| hScc1 | CdLS | GSE12603 | 5074070 | 5075386 | 1316 | 0 |
| hScc1 | G2 | GSE9613 | 5074526 | 5075527 | 1001 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9568 | mRNA | ALG1 | chr16 | 5061820 | 5075588 | 353 | mRNA | SB153 | chr16 | 5075235 | 5087782 | Sense/Antisense (SA) pairs |