Annotation Detail for PCDHB7
Basic Information Top
| Gene Symbol: | PCDHB7 ( MGC111391,MGC163205,PCDH-BETA7 ) |
|---|---|
| Gene Full Name: | protocadherin beta 7 |
| Band: | 5q31.3 |
| Quick Links | Entrez ID:56129; OMIM: 606333; Uniprot ID:PCDB7_HUMAN; ENSEMBL ID: ENSG00000113212; HGNC ID: 8692 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 169 | N-linked (GlcNAc...) (Potential). | |
| 418 | N-linked (GlcNAc...) (Potential). | |
| 436 | N-linked (GlcNAc...) (Potential). | |
| 567 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 169 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 418 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 436 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 567 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 64 | Phosphothreonine(PKA) | HMM predict |
| 169 | N-linked | HMM predict |
| 175 | N-linked | HMM predict |
| 191 | Phosphotyrosine(EGFR) | HMM predict |
| 223 | O-linked | HMM predict |
| 285 | Phosphothreonine(PKC) | HMM predict |
| 295 | N-linked | HMM predict |
| 309 | Phosphotyrosine(Syk) | HMM predict |
| 354 | Phosphoserine | HMM predict |
| 354 | Phosphoserine(MAPK) | HMM predict |
| 418 | N-linked | HMM predict |
| 436 | N-linked | HMM predict |
| 454 | O-linked | HMM predict |
| 463 | N-linked | HMM predict |
| 464 | N-linked | HMM predict |
| 465 | Phosphoserine(CDC2) | HMM predict |
| 493 | Phosphoserine(ATM) | HMM predict |
| 538 | Phosphoserine(IKK) | HMM predict |
| 542 | Phosphoserine(CK1) | HMM predict |
| 567 | N-linked | HMM predict |
| 584 | Phosphotyrosine(Jak) | HMM predict |
| 653 | O-linked | HMM predict |
| 670 | Phosphotyrosine(Jak) | HMM predict |
| 715 | Phosphoserine(PKA) | HMM predict |
| 744 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_018940
- Location:chr5 140532426-140536139
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Nanog | hES | GSE18292 | 140532246 | 140532448 | 202 | 80 |
| USF2 | HepG2 | E | 140525110 | 140525258 | 148 | 7243 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 140532234 | 140532849 | 615 | 0 |
| CTCF | G2 | GSE9613 | 140534040 | 140534644 | 604 | 0 |
| hScc1 | Bcell | GSE12603 | 140533804 | 140534488 | 684 | 0 |
Validated miRNA targets