Annotation Detail for PCDHB4
Basic Information Top
| Gene Symbol: | PCDHB4 ( PCDH-BETA4 ) |
|---|---|
| Gene Full Name: | protocadherin beta 4 |
| Band: | 5q31.3 |
| Quick Links | Entrez ID:56131; OMIM: 606330; Uniprot ID:PCDB4_HUMAN; ENSEMBL ID: ENSG00000081818; HGNC ID: 8689 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 183 | N-linked (GlcNAc...) (Potential). | |
| 417 | N-linked (GlcNAc...) (Potential). | |
| 435 | N-linked (GlcNAc...) (Potential). | |
| 566 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 183 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 417 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 435 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 566 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 172 | Phosphoserine(ATM) | HMM predict |
| 185 | Phosphoserine(CAMK2) | HMM predict |
| 208 | Phosphoserine(CK1) | HMM predict |
| 246 | Phosphotyrosine(Abl) | HMM predict |
| 354 | Phosphoserine(IKK) | HMM predict |
| 417 | N-linked | HMM predict |
| 435 | N-linked | HMM predict |
| 453 | O-linked | HMM predict |
| 462 | N-linked | HMM predict |
| 463 | N-linked | HMM predict |
| 537 | Phosphoserine(IKK) | HMM predict |
| 541 | Phosphoserine(CK1) | HMM predict |
| 566 | N-linked | HMM predict |
| 583 | Phosphotyrosine(Jak) | HMM predict |
| 652 | O-linked | HMM predict |
| 669 | Phosphotyrosine(Jak) | HMM predict |
| 716 | Phosphoserine(PKA) | HMM predict |
| 745 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_018938
- Location:chr5 140481764-140485384
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Fulvestrant-MCF7 | GSE14664 | 140475991 | 140476041 | 50 | 5749 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Nanog | hES | GSE18292 | 140487211 | 140487462 | 251 | 1952 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 140483095 | 140483837 | 742 | 0 |
| H3K4me3 | colorectal | cancer | 140482906 | 140483472 | 566 | 0 |
| hScc1 | Bcell | GSE12603 | 140483030 | 140483799 | 769 | 0 |
Validated miRNA targets