Annotation Detail for PCDHA13
Basic Information Top
| Gene Symbol: | PCDHA13 ( CNR5,CNRN5,CNRS5,CRNR5,PCDH-ALPHA13 ) |
|---|---|
| Gene Full Name: | protocadherin alpha 13 |
| Band: | 5q31.3 |
| Quick Links | Entrez ID:56136; OMIM: 606319; Uniprot ID:PCDAD_HUMAN; ENSEMBL ID: ENSG00000081842,ENSG00000239389,ENSG00000243232; HGNC ID: 8667 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 257 | N-linked (GlcNAc...) (Potential). | |
| 265 | N-linked (GlcNAc...) (Potential). | |
| 548 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 257 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 265 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 548 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 34 | Phosphoserine(ATM) | HMM predict |
| 158 | Phosphoserine(CK2) | HMM predict |
| 177 | Phosphotyrosine(INSR) | HMM predict |
| 243 | Phosphotyrosine(Syk) | HMM predict |
| 243 | Phosphotyrosine(EGFR) | HMM predict |
| 257 | N-linked | HMM predict |
| 265 | N-linked | HMM predict |
| 379 | Phosphoserine(CK1) | HMM predict |
| 379 | Phosphoserine | HMM predict |
| 438 | O-linked | HMM predict |
| 440 | O-linked | HMM predict |
| 460 | Phosphotyrosine(Jak) | HMM predict |
| 505 | Phosphoserine(CK1) | HMM predict |
| 509 | Phosphoserine(CK2) | HMM predict |
| 540 | Phosphoserine(IKK) | HMM predict |
| 548 | N-linked | HMM predict |
| 567 | Phosphothreonine(MAPK) | HMM predict |
| 576 | Phosphothreonine(PKC) | HMM predict |
| 633 | Phosphothreonine(PKC) | HMM predict |
| 660 | O-linked | HMM predict |
| 662 | O-linked | HMM predict |
| 664 | O-linked | HMM predict |
| 679 | O-linked | HMM predict |
| 679 | O-linked | HMM predict |
| 680 | O-linked | HMM predict |
| 683 | O-linked | HMM predict |
| 709 | O-linked | HMM predict |
| 742 | O-linked | HMM predict |
| 841 | O-linked | HMM predict |
| 841 | O-linked | HMM predict |
| 843 | O-linked | HMM predict |
| 846 | Phosphothreonine(MAPK) | HMM predict |
| 846 | O-linked | HMM predict |
| 922 | Phosphothreonine(PKC) | HMM predict |
| 932 | N-linked | HMM predict |
| 942 | N-linked | HMM predict |
- RefSeq ID: NM_018904
- Location:chr5 140242037-140372112
- strand:+
| No data |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 140285867 | 140286685 | 818 | 0 |
| ER | E2-MCF7 | GSE14664 | 140253632 | 140253709 | 77 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 140247704 | 140247740 | 36 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 140247699 | 140247739 | 40 | 0 |
| Oct1 | Hela | GSE14283 | 140247704 | 140247737 | 33 | 0 |
| Oct1 | Hela | GSE14283 | 140253641 | 140253718 | 77 | 0 |
| Oct1 | Hela | GSE14283 | 140270957 | 140270993 | 36 | 0 |
| TFAP2C | MCF7 | GSE21234 | 140276098 | 140276497 | 399 | 0 |
| hScc1 | Bcell | GSE12603 | 140285951 | 140286583 | 632 | 0 |
Validated miRNA targets