Annotation Detail for PRM1

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Basic Information Top

Gene Symbol:	PRM1 ( CT94.1,P1 )
Gene Full Name:	protamine 1
Band:	16p13.13
Quick Links	Entrez ID:5619; OMIM: 182880; Uniprot ID:HSP1_HUMAN; ENSEMBL ID: ENSG00000175646; HGNC ID: 9447
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:2 results
Predicted PTM Sites by profile HMM from dbPTM:7 results

No data

Location(AA)	Modification	Resource
13	Phosphoserine(PKA)	HMM predict
29	Phosphoserine(PKC)	HMM predict
29	Phosphoserine(PKG)	HMM predict
32	Phosphothreonine(PKC)	HMM predict
40	S-palmitoyl	HMM predict
44	Tyrosine	HMM predict
48	Cysteine	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_002761
Location:chr16 11282199-11282684
strand:-

Upstream the gene:17 results
Downstream the gene:2 results
Inside the gene:0 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	11299122	11299454	332	16604
CTCF	CD4	SISSRdata	11299122	11299454	332	16604
CTCF	G2	GSE9613	11299074	11299312	238	16509
FOXA1	MCF7	GSE15244	11294384	11294863	479	11939
FOXA1	MCF7	GSE15244	11298010	11298292	282	15467
H3ac	HepG2	E	11291395	11292404	1009	9215
NFkBII	GM12878	GSE19485	11286923	11288748	1825	5151
NFkBII	GM18505	GSE19485	11287152	11288597	1445	5190
NFkBII	GM18526	GSE19485	11287179	11288744	1565	5277
NRSF	Jurkat	GSE13047	11287136	11287462	326	4615
NRSF	Jurkat	SISSRdata	11287147	11287384	237	4581
NRSF-mono	Jurkat	QuESTdata	11287133	11287444	311	4604
Nanog	hES	GSE18292	11292821	11293187	366	10320
RARA	MCF7	GSE15244	11294384	11294863	479	11939
TFAP2C	MCF7	GSE21234	11294427	11295198	771	12128
hScc1	Bcell	GSE12603	11299001	11299380	379	16506
p130	Quiescent	GSE19898	11298951	11299127	176	16355

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
H3ac	HepG2	E	11280682	11281223	541	1247
USF2	HepG2	E	11280682	11281625	943	1046

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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