AutismKB 2.0

Annotation Detail for ZNF253


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Basic Information Top
Gene Symbol:ZNF253 ( BMZF-1,BMZF1,FLJ90391,ZNF411 )
Gene Full Name: zinc finger protein 253
Band: 19p13.11
Quick LinksEntrez ID:56242; OMIM: 606954; Uniprot ID:ZN253_HUMAN; ENSEMBL ID: ENSG00000213988; HGNC ID: 13497
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
14Phosphoserine(CK1)HMM predict
167Phosphothreonine(PKA)HMM predict
177S-palmitoylHMM predict
200Phosphotyrosine(Jak)HMM predict
214N-linkedHMM predict
228Phosphotyrosine(Jak)HMM predict
238N-linkedHMM predict
244N-linkedHMM predict
260N-linkedHMM predict
266N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021047
  • Location:chr19 19837713-19865291
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 19837472 19837871 399 42
Gata1 K562GSE18868 19837231 19837910 679 143
Gata2 K562GSE18868 19837439 19837933 494 28
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP k562GSE8489 19862103 19862280 177 0
Myc K562GSE19551 19837473 19838239 766 0
PHF8 Hs68minusFBSGSE20725 19837549 19838692 1143 0
PHF8 Hs68plusFBSGSE20725 19837405 19838884 1479 0
Pol2 GM12878GSE19551 19837530 19838422 892 0
p130 QuiescentGSE19898 19837513 19838207 694 0
p130 SenescentGSE19898 19837485 19838373 888 0
p130 shRbQuiescentGSE19898 19837567 19838189 622 0
p130 shRbSenescentGSE19898 19837566 19838058 492 0
Validated miRNA targets Top
Cis-Nats regulation Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018