AutismKB 2.0

Annotation Detail for RAD18


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Basic Information Top
Gene Symbol:RAD18 ( RNF73 )
Gene Full Name: RAD18 homolog (S. cerevisiae)
Band: 3p25.3
Quick LinksEntrez ID:56852; OMIM: 605256; Uniprot ID:RAD18_HUMAN; ENSEMBL ID: ENSG00000070950; HGNC ID: 18278
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
99Phosphoserine.
103Phosphoserine.
107Phosphoserine.
118Phosphothreonine.
158Phosphoserine.
164Phosphoserine.
322Phosphoserine.
403Phosphoserine.
409Phosphoserine.
471Phosphoserine.
Location(AA) Modifications Resource
99Phosphoserine.Swiss-Prot 53.0
99PhosphoserinePhospho.ELM 6.0
103PhosphoserinePhospho.ELM 6.0
118Phosphothreonine.Swiss-Prot 53.0
409Phosphoserine.Swiss-Prot 53.0
409PhosphoserinePhospho.ELM 6.0
471Phosphoserine.Swiss-Prot 53.0
471PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
62O-linkedHMM predict
103Phosphoserine(CDC2)HMM predict
103Phosphoserine(CDK)HMM predict
106Phosphoserine(CK2)HMM predict
107Phosphoserine(CDC2)HMM predict
107Phosphoserine(CK1)HMM predict
109Phosphoserine(CK1)HMM predict
125Phosphoserine(CK1)HMM predict
142Phosphoserine(IKK)HMM predict
153N-linkedHMM predict
158Phosphoserine(CDC2)HMM predict
172Phosphothreonine(PKA)HMM predict
174Phosphoserine(CK1)HMM predict
225Phosphoserine(CK1)HMM predict
331Phosphothreonine(PKC)HMM predict
342Phosphotyrosine(Jak)HMM predict
394N-linkedHMM predict
400N-linkedHMM predict
403Phosphoserine(ATM)HMM predict
409PhosphoserineHMM predict
432Phosphoserine(CK1)HMM predict
432Phosphoserine(CK2)HMM predict
438Phosphoserine(IKK)HMM predict
440N-linkedHMM predict
441Phosphoserine(CK1)HMM predict
442Phosphoserine(CK2)HMM predict
478Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020165
  • Location:chr3 8896560-8980145
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 8987706 8988002 296 7709
CTCF CD4SISSRdata 8987706 8988002 296 7709
CTCF G2GSE9613 8983470 8983678 208 3429
CTCF G2GSE9613 8985048 8985227 179 4992
CTCF G2GSE9613 8987807 8988236 429 7876
E2F4 G0GSE7516 8979851 8980676 825 118
FOXA1 MCF7GSE15244 8980300 8980676 376 343
H3ac HepG2E 8979717 8980640 923 33
LIN9 G0GSE7516 8979717 8980676 959 51
LIN9 SGSE7516 8979717 8980676 959 51
P300 T30-glioblastomaGSE21026 8979717 8980785 1068 106
PHF8 293TGSE20725 8979783 8980539 756 16
PHF8 HeLaGSE20725 8979470 8980877 1407 28
RARA MCF7GSE15244 8980300 8980676 376 343
TAFII hESGSE17917 8987732 8988007 275 7724
hScc1 BcellGSE12603 8987807 8988236 429 7876
hScc1 CdLSGSE12603 8987807 8988436 629 7976
hScc1 G2GSE9613 8987807 8988723 916 8120
p130 SenescentGSE19898 8979596 8980723 1127 14
p130 shRbQuiescentGSE19898 8979644 8980649 1005 1
p130 G0GSE7516 8979717 8980676 959 51
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 8886066 8886823 757 10116
CTCF G2GSE9613 8879112 8879899 787 17055
RARA MCF7GSE15244 8885880 8887053 1173 10094
Stat6 IL-4-hr4GSE17850 8880061 8880636 575 16212
hScc1 BcellGSE12603 8879076 8879355 279 17345
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 8953453 8954416 963 0
ER E2-MCF7GSE14664 8959886 8959921 35 0
ETS1 JurkatGSE17954 8979601 8980601 1000 0
FOXA1 MCF7GSE15244 8953588 8954166 578 0
FOXA1 MCF7GSE15244 8971653 8971872 219 0
FOXA1 MCF7GSE15244 8979717 8979948 231 0
H3K4me2 HCT116GSE10453 8979018 8979302 284 0
Oct1 H2O2-HelaGSE14283 8897064 8897092 28 0
Oct1 H2O2-HelaGSE14283 8919448 8919480 32 0
Oct1 H2O2-HelaGSE14283 8951048 8951081 33 0
Oct1 H2O2-HelaGSE14283 8962354 8962389 35 0
Oct1 HelaGSE14283 8924821 8924907 86 0
Oct1 HelaGSE14283 8937594 8937644 50 0
Oct1 HelaGSE14283 8948101 8948132 31 0
Oct1 HelaGSE14283 8951028 8951087 59 0
Oct1 HelaGSE14283 8959885 8959913 28 0
Oct1 HelaGSE14283 8962354 8962389 35 0
Oct1 HelaGSE14283 8963604 8963634 30 0
Oct1 HelaGSE14283 8969338 8969442 104 0
P300 T0-glioblastomaGSE21026 8953473 8954250 777 0
P300 T30-glioblastomaGSE21026 8953488 8955345 1857 0
PAX3-FKHR Rh4GSE19063 8953236 8955730 2494 0
RARA MCF7GSE15244 8979717 8979884 167 0
Rb SenescentGSE19898 8979822 8980402 580 0
TFAP2C MCF7GSE21234 8979761 8980388 627 0
p130 QuiescentGSE19898 8979675 8980299 624 0
p130 shRbSenescentGSE19898 8979424 8980458 1034 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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