Annotation Detail for SDR39U1
Basic Information Top
| Gene Symbol: | SDR39U1 ( C14orf124,HCDI ) |
|---|---|
| Gene Full Name: | short chain dehydrogenase/reductase family 39U, member 1 |
| Band: | 14q12 |
| Quick Links | Entrez ID:56948; OMIM: NA; Uniprot ID:D39U1_HUMAN; ENSEMBL ID: ENSG00000100445; HGNC ID: 20275 |
| Relate to Another Database: | SFARIGene; denovo-db |
Post Translation Modification- RefSeq ID: NM_020195
- Location:chr14 23978813-23981846
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | k562 | GSE8489 | 23981869 | 23982844 | 975 | 510 |
| HIF1 | Hypo | HepG2 | 23981654 | 23982107 | 453 | 34 |
| RARA | MCF7 | GSE15244 | 23981690 | 23982140 | 450 | 69 |
| RARG | MCF7 | GSE15244 | 23981690 | 23982486 | 796 | 242 |
| TAF | Hela | GSE8489 | 23982140 | 23982844 | 704 | 646 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 23981036 | 23982427 | 1391 | 0 |
| H3ac | HepG2 | E | 23979450 | 23982844 | 3394 | 0 |
| Rb | Growing | GSE19898 | 23981361 | 23981536 | 175 | 0 |
| Rb | Senescent | GSE19898 | 23981084 | 23982188 | 1104 | 0 |
| Rb | shRbSenescence | GSE19898 | 23981510 | 23981778 | 268 | 0 |
| USF1 | HepG2 | E | 23979450 | 23982732 | 3282 | 0 |
| USF2 | HepG2 | E | 23980460 | 23982592 | 2132 | 0 |
| hScc1 | Bcell | GSE12603 | 23981197 | 23981510 | 313 | 0 |
| hScc1 | CdLS | GSE12603 | 23980759 | 23981546 | 787 | 0 |
| p130 | Quiescent | GSE19898 | 23978784 | 23978921 | 137 | 0 |
| p130 | Quiescent | GSE19898 | 23981327 | 23981908 | 581 | 0 |
| p130 | Senescent | GSE19898 | 23981060 | 23982055 | 995 | 0 |
| p130 | shRbQuiescent | GSE19898 | 23980618 | 23982316 | 1698 | 0 |
| p130 | shRbSenescent | GSE19898 | 23981153 | 23982189 | 1036 | 0 |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7725 | mRNA | KIAA0323 | chr14 | 23969015 | 23980380 | 869 | mRNA | C14orf124 | chr14 | 23978813 | 23981822 | Sense/Antisense (SA) pairs |