AutismKB 2.0

Annotation Detail for SLC12A9


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Basic Information Top
Gene Symbol:SLC12A9 ( CIP1,FLJ46905 )
Gene Full Name: solute carrier family 12 (potassium/chloride transporters), member 9
Band: 7q22.1
Quick LinksEntrez ID:56996; OMIM: NA; Uniprot ID:S12A9_HUMAN; ENSEMBL ID: ENSG00000146828; HGNC ID: 17435
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
228N-linked (GlcNAc...) (Potential).
243N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020246
  • Location:chr7 100288293-100302568
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 100287665 100287878 213 522
CTCF CD4SISSRdata 100287665 100287878 213 522
CTCF HelaGSE12889 100287635 100288037 402 458
CTCF G2GSE9613 100287593 100288365 772 315
Myc K562GSE19551 100287626 100288527 901 217
Oct1 HelaGSE14283 100286005 100286037 32 2273
PHF8 HeLaGSE20725 100287659 100288788 1129 70
Rb SenescentGSE19898 100287505 100288090 585 496
hScc1 BcellGSE12603 100287593 100288047 454 474
hScc1 CdLSGSE12603 100287593 100288599 1006 198
hScc1 G2GSE9613 100287593 100288726 1133 134
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 100292378 100292560 182 0
CTCF G2GSE9613 100299045 100299222 177 0
CTCF G2GSE9613 100301038 100301446 408 0
CTCF G2GSE9613 100301738 100302143 405 0
Oct1 HelaGSE14283 100294408 100294450 42 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018