AutismKB 2.0

Annotation Detail for PCNP


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Basic Information Top
Gene Symbol:PCNP ( DKFZp781I24156 )
Gene Full Name: PEST proteolytic signal containing nuclear protein
Band: 3q12.3
Quick LinksEntrez ID:57092; OMIM: NA; Uniprot ID:PCNP_HUMAN; ENSEMBL ID: ENSG00000081154; HGNC ID: 30023
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
64N6-acetyllysine.
66Phosphothreonine.
69Phosphoserine.
77Phosphoserine.
87Phosphoserine.
119Phosphoserine.
139Phosphothreonine.
142Phosphoserine.
147Phosphoserine.
150N6-acetyllysine.
152N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
66Phosphothreonine(PKA)HMM predict
80Phosphothreonine(PKC)HMM predict
119Phosphoserine(CK1)HMM predict
119Phosphoserine(CK2)HMM predict
139Phosphothreonine(MAPK)HMM predict
142O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020357
  • Location:chr3 102775731-102795968
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 102774490 102776051 1561 461
ETS1 JurkatGSE17954 102774897 102776302 1405 132
FOXA1 MCF7GSE15244 102774909 102775760 851 397
H3ac HepG2E 102774564 102775578 1014 661
RARA MCF7GSE15244 102774909 102775615 706 470
TAF k562GSE8489 102774621 102775615 994 614
hScc1 BcellGSE12603 102775063 102775543 480 429
hScc1 CdLSGSE12603 102774909 102775897 988 329
hScc1 G2GSE9613 102774909 102776148 1239 203
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 102815371 102815398 27 19416
p63 keratinocytesGSE17611 102803198 102804021 823 7641
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 102777996 102778209 213 0
FOXA1 MCF7GSE15244 102776078 102776619 541 0
H3K4me3 colorectalcancer 102776078 102776782 704 0
H3ac HepG2E 102775968 102776891 923 0
H3ac HepG2E 102777496 102778669 1173 0
Oct1 HelaGSE14283 102781060 102781091 31 0
Oct1 HelaGSE14283 102781317 102781367 50 0
PHF8 293TGSE20725 102775130 102776591 1461 0
Rb QuiescentGSE19898 102775544 102775990 446 0
TAF k562GSE8489 102776051 102777715 1664 0
TAFII hESGSE17917 102775346 102776324 978 0
p130 shRbQuiescentGSE19898 102775323 102776537 1214 0
p130 shRbSenescentGSE19898 102775280 102776352 1072 0
p130 shRbSenescentGSE19898 102776497 102776696 199 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018