AutismKB 2.0

Annotation Detail for PDSS2


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Basic Information Top
Gene Symbol:PDSS2 ( C6orf210,DLP1,bA59I9.3,hDLP1 )
Gene Full Name: prenyl (decaprenyl) diphosphate synthase, subunit 2
Band: 6q21
Quick LinksEntrez ID:57107; OMIM: 610564; Uniprot ID:DLP1_HUMAN; ENSEMBL ID: ENSG00000164494; HGNC ID: 23041
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
19PhosphoserineHMM predict
43Phosphoserine(PKG)HMM predict
54Phosphoserine(CK2)HMM predict
96Phosphothreonine(PKC)HMM predict
126O-linkedHMM predict
127Phosphoserine(IKK)HMM predict
129N-linkedHMM predict
134N-linkedHMM predict
135Phosphotyrosine(Syk)HMM predict
230N-linkedHMM predict
232Phosphothreonine(PKC)HMM predict
233Phosphoserine(CK1)HMM predict
396ThreonineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020381
  • Location:chr6 107580455-107887447
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 107887838 107888195 357 569
P300 T30-glioblastomaGSE21026 107886950 107887989 1039 22
PHF8 HeLaGSE20725 107886727 107888483 1756 158
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
AR prostate-cancerGSE14092 107568420 107568935 515 11778
CTCF G2GSE9613 107580104 107580258 154 275
Oct1 HelaGSE14283 107560887 107560922 35 19551
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 107887314 107887513 199 0
CTCF CD4SISSRdata 107887314 107887513 199 0
CTCF G2GSE9613 107606874 107607151 277 0
CTCF G2GSE9613 107618581 107618772 191 0
CTCF G2GSE9613 107745964 107746341 377 0
CTCF G2GSE9613 107886741 107887948 1207 0
ER E2-MCF7GSE14664 107596477 107596510 33 0
ETS1 JurkatGSE17954 107886663 107888195 1532 0
Fos K562GSE19551 107639806 107640227 421 0
Fos K562GSE19551 107703052 107703797 745 0
FoxA1 MCF7MACSdata 107789926 107790195 269 0
GABP k562GSE8489 107685909 107686259 350 0
H3K4me3 colorectalcancer 107886345 107887351 1006 0
H3ac HepG2E 107886345 107887569 1224 0
KLF4 hESGSE17917 107613565 107613851 286 0
Myc K562GSE19551 107639937 107640178 241 0
Myc K562GSE19551 107703194 107703608 414 0
Myc hESGSE17917 107774711 107775043 332 0
Nanog ESGSE20650 107646073 107646372 299 0
Oct1 H2O2-HelaGSE14283 107596476 107596510 34 0
Oct1 HelaGSE14283 107596478 107596510 32 0
Oct1 HelaGSE14283 107713778 107713830 52 0
Oct1 HelaGSE14283 107855759 107855803 44 0
P300 T0-glioblastomaGSE21026 107669577 107670252 675 0
P300 T0-glioblastomaGSE21026 107886924 107887656 732 0
RARA MCF7GSE15244 107886669 107887351 682 0
SRF HepG2GSE8489 107646412 107646627 215 0
TAF k562GSE8489 107886345 107887418 1073 0
TFAP2C MCF7GSE21234 107669460 107670082 622 0
TFAP2C MCF7GSE21234 107700173 107700575 402 0
hScc1 BcellGSE12603 107746005 107746341 336 0
hScc1 BcellGSE12603 107886844 107887279 435 0
hScc1 CdLSGSE12603 107745847 107746412 565 0
hScc1 G2GSE9613 107745964 107746375 411 0
hScc1 G2GSE9613 107886669 107887315 646 0
p130 SenescentGSE19898 107669673 107669928 255 0
p63 keratinocytesGSE17611 107656657 107657247 590 0
p63 keratinocytesGSE17611 107669475 107670155 680 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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