Annotation Detail for C20orf3
Basic Information Top
| Gene Symbol: | C20orf3 ( APMAP,BSCv ) |
|---|---|
| Gene Full Name: | chromosome 20 open reading frame 3 |
| Band: | 20p11.2 |
| Quick Links | Entrez ID:57136; OMIM: NA; Uniprot ID:APMAP_HUMAN; ENSEMBL ID: ENSG00000101474; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 160 | N-linked (GlcNAc...). | |
| 196 | N-linked (GlcNAc...). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 160 | N-linked (GlcNAc...). | Swiss-Prot 53.0 |
| 196 | N-linked (GlcNAc...). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 71 | Phosphoserine(IKK) | HMM predict |
| 160 | N-linked | HMM predict |
| 368 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_020531
- Location:chr20 24891580-24921424
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 24923524 | 24923842 | 318 | 2259 |
| CTCF | CD4 | SISSRdata | 24923524 | 24923842 | 318 | 2259 |
| CTCF | Hela | GSE12889 | 24923437 | 24923685 | 248 | 2137 |
| CTCF | G2 | GSE9613 | 24923380 | 24923748 | 368 | 2140 |
| ETS1 | Jurkat | GSE17954 | 24921063 | 24922088 | 1025 | 151 |
| GABP | Hela | GSE8489 | 24921887 | 24923124 | 1237 | 1081 |
| GABP | k562 | GSE8489 | 24921662 | 24922647 | 985 | 730 |
| H3ac | HepG2 | E | 24921918 | 24922828 | 910 | 949 |
| NFkBII | GM15510 | GSE19485 | 24920777 | 24922190 | 1413 | 59 |
| Pol2 | GM12878 | GSE19551 | 24921106 | 24921884 | 778 | 71 |
| hScc1 | Bcell | GSE12603 | 24923124 | 24924140 | 1016 | 2208 |
| hScc1 | CdLS | GSE12603 | 24922262 | 24922939 | 677 | 1176 |
| hScc1 | CdLS | GSE12603 | 24923234 | 24924515 | 1281 | 2450 |
| hScc1 | G2 | GSE9613 | 24923197 | 24924213 | 1016 | 2281 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FoxA1 | MCF7 | MACSdata | 24919452 | 24919596 | 144 | 0 |
| H3K4me3 | colorectal | cancer | 24920438 | 24920924 | 486 | 0 |
| H3ac | HepG2 | E | 24918734 | 24920890 | 2156 | 0 |
| PHF8 | 293T | GSE20725 | 24920789 | 24921850 | 1061 | 0 |
| PHF8 | HeLa | GSE20725 | 24920848 | 24921913 | 1065 | 0 |
| PHF8 | Hs68minusFBS | GSE20725 | 24920744 | 24922007 | 1263 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 24920708 | 24922041 | 1333 | 0 |
| TFAP2C | MCF7 | GSE21234 | 24907570 | 24908036 | 466 | 0 |
| TFAP2C | MCF7 | GSE21234 | 24919498 | 24920211 | 713 | 0 |
| hScc1 | Bcell | GSE12603 | 24898171 | 24898543 | 372 | 0 |
| hScc1 | Bcell | GSE12603 | 24921038 | 24921626 | 588 | 0 |
| p130 | shRbSenescent | GSE19898 | 24920971 | 24921716 | 745 | 0 |
Validated miRNA targets