Annotation Detail for RALGAPB

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	RALGAPB ( DKFZp686N19168,DKFZp781M2411,FLJ43270,FLJ43928,KIAA1219,RalGAPbeta,dJ1100H13.1 )
Gene Full Name:	Ral GTPase activating protein, beta subunit (non-catalytic)
Band:	20q11.23
Quick Links	Entrez ID:57148; OMIM: NA; Uniprot ID:RLGPB_HUMAN; ENSEMBL ID: ENSG00000170471; HGNC ID: 29221
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:4 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
417	Phosphoserine.
421	Phosphoserine.
720	Phosphoserine (By similarity).
734	Phosphothreonine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_020336
Location:chr20 36534899-36640915
strand:+

Upstream the gene:13 results
Downstream the gene:1 results
Inside the gene:5 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	36534449	36534852	403	249
CTCF	CD4	SISSRdata	36534449	36534852	403	249
CTCF	G2	GSE9613	36534389	36534893	504	259
ETS1	Jurkat	GSE17954	36534437	36535308	871	27
Fos	K562	GSE19551	36522181	36522715	534	12452
H3K4me2	HCT116	GSE10453	36533728	36534579	851	746
H3ac	HepG2	E	36533728	36534770	1042	651
Jun	K562	GSE19551	36522330	36522689	359	12390
Myc	K562	GSE19551	36522277	36522635	358	12444
Rb	Growing	GSE19898	36534579	36534929	350	146
Rb	Senescent	GSE19898	36534464	36535063	599	136
Rb	shRbSenescence	GSE19898	36534662	36534941	279	98
TAF	Hela	GSE8489	36522399	36522696	297	12352

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
hScc1	Bcell	GSE12603	36641468	36641814	346	726

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Gata2	K562	GSE18868	36625397	36626480	1083	0
H3K4me3	colorectal	cancer	36535325	36535513	188	0
H3K4me3	colorectal	cancer	36536067	36536309	242	0
PHF8	HeLa	GSE20725	36534369	36535589	1220	0
Rb	Senescent	GSE19898	36535411	36535611	200	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved