Annotation Detail for LYRM1
Basic Information Top
| Gene Symbol: | LYRM1 ( A211C6.1 ) |
|---|---|
| Gene Full Name: | LYR motif containing 1 |
| Band: | 16p12.3 |
| Quick Links | Entrez ID:57149; OMIM: NA; Uniprot ID:LYRM1_HUMAN; ENSEMBL ID: ENSG00000102897; HGNC ID: 25074 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 33 | Phosphothreonine(CK2) | HMM predict |
| 39 | Phosphotyrosine(INSR) | HMM predict |
| 53 | N-linked | HMM predict |
| 93 | Phosphothreonine(MAPK) | HMM predict |
| 110 | Phosphoserine(PKC) | HMM predict |
| 110 | Phosphoserine(PKG) | HMM predict |
| 113 | Valine | HMM predict |
- RefSeq ID: NM_020424
- Location:chr16 20819926-20843826
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 20819616 | 20819927 | 311 | 155 |
| Myc | hES | GSE17917 | 20819683 | 20819938 | 255 | 116 |
| PHF8 | Hs68minusFBS | GSE20725 | 20818994 | 20820316 | 1322 | 272 |
| PHF8 | Hs68plusFBS | GSE20725 | 20818894 | 20820284 | 1390 | 338 |
| Rb | shRbQuiescent | GSE19898 | 20819647 | 20819909 | 262 | 149 |
| Rb | shRbSenescence | GSE19898 | 20819552 | 20819896 | 344 | 203 |
| USF2 | HepG2 | E | 20819302 | 20820148 | 846 | 202 |
| p130 | Quiescent | GSE19898 | 20819298 | 20819833 | 535 | 361 |
| p130 | shRbSenescent | GSE19898 | 20819167 | 20820239 | 1072 | 224 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | MCF7 | GSE19013 | 20820187 | 20821003 | 816 | 0 |
| Fos | K562 | GSE19551 | 20834505 | 20835085 | 580 | 0 |
| H3ac | HepG2 | E | 20819343 | 20820632 | 1289 | 0 |
| H3ac | HepG2 | E | 20820947 | 20821771 | 824 | 0 |
| Myc | K562 | GSE19551 | 20837548 | 20838335 | 787 | 0 |
| RARA | MCF7 | GSE15244 | 20820074 | 20820632 | 558 | 0 |
| Rb | Growing | GSE19898 | 20830010 | 20830175 | 165 | 0 |
| TAF | Hela | GSE8489 | 20819419 | 20820632 | 1213 | 0 |
| TFAP2C | MCF7 | GSE21234 | 20820013 | 20820926 | 913 | 0 |
| p130 | Senescent | GSE19898 | 20829972 | 20830397 | 425 | 0 |
| p130 | shRbQuiescent | GSE19898 | 20829755 | 20830407 | 652 | 0 |
| p130 | shRbSenescent | GSE19898 | 20830129 | 20830298 | 169 | 0 |
Validated miRNA targets