AutismKB 2.0

Annotation Detail for RALGAPA2


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Basic Information Top
Gene Symbol:RALGAPA2 ( AS250,C20orf74,FLJ12819,KIAA1272,bA287B20.1,dJ1049G11,dJ1049G11.4 )
Gene Full Name: Ral GTPase activating protein, alpha subunit 2 (catalytic)
Band: 20p11.23
Quick LinksEntrez ID:57186; OMIM: NA; Uniprot ID:RGPA2_HUMAN; ENSEMBL ID: ENSG00000188559; HGNC ID: 16207
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
373Phosphoserine (By similarity).
376Phosphoserine (By similarity).
379Phosphoserine (By similarity).
486Phosphoserine; by PKB.
696Phosphoserine; by PKB.
715Phosphothreonine; by PKB.
820Phosphoserine.
821Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020343
  • Location:chr20 20340670-20641122
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 20640926 20642155 1229 418
Fos K562GSE19551 20641374 20641841 467 485
Fos K562GSE19551 20648128 20648376 248 7130
P300 T30-glioblastomaGSE21026 20641242 20642213 971 605
PHF8 293TGSE20725 20641501 20642144 643 700
Rb GrowingGSE19898 20641334 20641565 231 327
Rb QuiescentGSE19898 20641348 20641652 304 378
Rb SenescentGSE19898 20641369 20641693 324 409
Rb shRbQuiescentGSE19898 20641370 20641618 248 372
Rb shRbSenescenceGSE19898 20641331 20641589 258 338
TAFII hESGSE17917 20641502 20641865 363 561
p130 QuiescentGSE19898 20641376 20641773 397 452
p130 SenescentGSE19898 20641332 20641858 526 473
p130 shRbQuiescentGSE19898 20641296 20642023 727 537
p130 shRbSenescentGSE19898 20641295 20641589 294 320
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 20336133 20336994 861 4107
FOXA1 eGFPGSE10845 20336133 20336994 861 4107
FoxA1 MCF7MACSdata 20336516 20336841 325 3992
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 20593462 20593653 191 0
CTCF CD4SISSRdata 20593462 20593653 191 0
CTCF G2GSE9613 20365951 20366128 177 0
CTCF G2GSE9613 20522179 20522640 461 0
CTCF G2GSE9613 20593329 20593691 362 0
ER Breast-CancerGSE22609 20369913 20370387 474 0
ER MCF7GSE19013 20369708 20370719 1011 0
ER MCF7GSE19013 20640716 20641229 513 0
FoxA1 MCF7MACSdata 20477359 20477731 372 0
H3ac HepG2E 20638920 20640839 1919 0
NFkBII GM12878GSE19485 20353880 20355635 1755 0
Nanog ESGSE20650 20380913 20381696 783 0
Nanog ESGSE20650 20406356 20406708 352 0
RING1B hESGSE13084 20426719 20427194 475 0
Stat6 IL-4-hr1GSE17850 20539175 20539693 518 0
TFAP2C MCF7GSE21234 20477838 20478856 1018 0
hScc1 BcellGSE12603 20497141 20497653 512 0
hScc1 BcellGSE12603 20522143 20522542 399 0
hScc1 BcellGSE12603 20563373 20563512 139 0
hScc1 BcellGSE12603 20593194 20594049 855 0
hScc1 BcellGSE12603 20597344 20597534 190 0
hScc1 BcellGSE12603 20619526 20619742 216 0
hScc1 CdLSGSE12603 20496988 20497769 781 0
hScc1 CdLSGSE12603 20593122 20594220 1098 0
p130 SenescentGSE19898 20381039 20381505 466 0
p63 keratinocytesGSE17611 20531719 20532726 1007 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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