AutismKB 2.0

Annotation Detail for PTGDS


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Basic Information Top
Gene Symbol:PTGDS ( L-PGDS,LPGDS,PDS,PGD2,PGDS,PGDS2 )
Gene Full Name: prostaglandin D2 synthase 21kDa (brain)
Band: 9q34.3
Quick LinksEntrez ID:5730; OMIM: 176803; Uniprot ID:PTGDS_HUMAN; ENSEMBL ID: ENSG00000107317; HGNC ID: 9592
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
51N-linked (GlcNAc...) (complex).
78N-linked (GlcNAc...) (complex).
Location(AA) Modifications Resource
51N-linked (GlcNAc...).Swiss-Prot 53.0
78N-linked (GlcNAc...).Swiss-Prot 53.0
Location(AA) Modification Resource
51N-linkedHMM predict
78N-linkedHMM predict
114Phosphoserine(Jak)HMM predict
128Phosphotyrosine(Syk)HMM predict
133Phosphoserine(ATM)HMM predict
154Phosphothreonine(MAPK)HMM predict
154PhosphothreonineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000954
  • Location:chr9 138991776-138996013
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Breast-CancerGSE22609 138989691 138990235 544 1814
hScc1 BcellGSE12603 138983098 138983528 430 8464
hScc1 BcellGSE12603 138989924 138990904 980 1363
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 138991691 138992360 669 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018