AutismKB 2.0

Annotation Detail for REXO1


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Basic Information Top
Gene Symbol:REXO1 ( ELOABP1,EloA-BP1,KIAA1138,REX1,TCEB3BP1 )
Gene Full Name: REX1, RNA exonuclease 1 homolog (S. cerevisiae)
Band: 19p13.3
Quick LinksEntrez ID:57455; OMIM: 609614; Uniprot ID:REXO1_HUMAN; ENSEMBL ID: ENSG00000079313; HGNC ID: 24616
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
358Phosphoserine.
526Phosphoserine (By similarity).
Location(AA) Modifications Resource
358PhosphoserinePhospho.ELM 6.0
526Phosphoserine (By similarity).Swiss-Prot 53.0
610PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
59Phosphotyrosine(Syk)HMM predict
72N-linkedHMM predict
109Phosphotyrosine(EGFR)HMM predict
133N-linkedHMM predict
137O-linkedHMM predict
152Phosphoserine(ATM)HMM predict
160Phosphoserine(MAPK)HMM predict
165Phosphotyrosine(Syk)HMM predict
168O-linkedHMM predict
191MethylarginineHMM predict
213PhosphoserineHMM predict
213Phosphoserine(PKG)HMM predict
234Phosphotyrosine(INSR)HMM predict
234SulfotyrosineHMM predict
239N-linkedHMM predict
260MethylarginineHMM predict
262O-linkedHMM predict
265O-linkedHMM predict
268Phosphotyrosine(Syk)HMM predict
268Phosphotyrosine(Jak)HMM predict
269PhosphothreonineHMM predict
269Phosphothreonine(MAPK)HMM predict
269Phosphothreonine(CDC2)HMM predict
287Phosphoserine(CK2)HMM predict
302O-linkedHMM predict
302O-linkedHMM predict
306Phosphothreonine(MAPK)HMM predict
306Phosphothreonine(CDK)HMM predict
358Phosphoserine(IKK)HMM predict
358Phosphoserine(CDC2)HMM predict
365Phosphoserine(ATM)HMM predict
422Phosphoserine(CDC2)HMM predict
422PhosphoserineHMM predict
422Phosphoserine(CDK)HMM predict
439O-linkedHMM predict
441O-linkedHMM predict
459Phosphoserine(PKB)HMM predict
459Phosphoserine(CDC2)HMM predict
459Phosphoserine(IKK)HMM predict
485Phosphothreonine(PKC)HMM predict
505Phosphoserine(ATM)HMM predict
526PhosphoserineHMM predict
526Phosphoserine(CK2)HMM predict
552Phosphoserine(CK1)HMM predict
552Phosphoserine(ATM)HMM predict
554Phosphoserine(CK1)HMM predict
573O-linkedHMM predict
573Phosphoserine(CDC2)HMM predict
577Phosphoserine(CDK)HMM predict
577Phosphoserine(ATM)HMM predict
577O-linkedHMM predict
577Phosphoserine(CDC2)HMM predict
581Phosphoserine(CK1)HMM predict
583Phosphoserine(CK1)HMM predict
590O-linkedHMM predict
591Phosphoserine(CK1)HMM predict
599SulfotyrosineHMM predict
644Phosphoserine(CK1)HMM predict
664Phosphoserine(PKG)HMM predict
721Phosphoserine(CK1)HMM predict
746Phosphothreonine(PKC)HMM predict
751Phosphothreonine(PKC)HMM predict
757Phosphoserine(IKK)HMM predict
757Phosphoserine(ATM)HMM predict
780O-linkedHMM predict
785O-linkedHMM predict
854Phosphoserine(CDK)HMM predict
854Phosphoserine(CDC2)HMM predict
860Phosphotyrosine(Syk)HMM predict
867Phosphothreonine(PKC)HMM predict
906Phosphoserine(IKK)HMM predict
913Phosphoserine(CK1)HMM predict
914Phosphoserine(MAPK)HMM predict
914PhosphoserineHMM predict
914Phosphoserine(CDC2)HMM predict
973S-palmitoylHMM predict
974S-palmitoylHMM predict
996SulfotyrosineHMM predict
1053Phosphoserine(CK1)HMM predict
1121Phosphothreonine(PKC)HMM predict
1198Phosphoserine(CK2)HMM predict
1205S-farnesylHMM predict
1217AlanineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_020695
  • Location:chr19 1766247-1799449
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1799182 1800115 933 199
TAF k562GSE8489 1800972 1801404 432 1739
hScc1 BcellGSE12603 1799182 1799830 648 57
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 1777202 1777378 176 0
CTCF CD4GSE12889 1788617 1788932 315 0
CTCF CD4SISSRdata 1777202 1777378 176 0
CTCF CD4SISSRdata 1788617 1788932 315 0
CTCF HelaGSE12889 1777193 1777436 243 0
CTCF JurkatGSE12889 1788642 1788934 292 0
CTCF G2GSE9613 1768672 1769028 356 0
CTCF G2GSE9613 1773388 1773596 208 0
CTCF G2GSE9613 1777092 1777345 253 0
CTCF G2GSE9613 1781698 1781944 246 0
CTCF G2GSE9613 1784243 1784494 251 0
CTCF G2GSE9613 1788444 1788983 539 0
CTCF G2GSE9613 1794551 1794769 218 0
CTCF G2GSE9613 1796153 1796345 192 0
ETS1 JurkatGSE17954 1798853 1800007 1154 0
Gata1 K562GSE18868 1787670 1788332 662 0
Gata2 K562GSE18868 1787606 1788523 917 0
H3K4me3 colorectalcancer 1798269 1799079 810 0
H3ac HepG2E 1797913 1798852 939 0
P300 T30-glioblastomaGSE21026 1798339 1800104 1765 0
PHF8 Hs68plusFBSGSE20725 1798287 1799978 1691 0
TAF k562GSE8489 1797913 1798747 834 0
hScc1 BcellGSE12603 1788518 1788983 465 0
hScc1 BcellGSE12603 1791123 1791642 519 0
hScc1 BcellGSE12603 1794063 1794697 634 0
p130 SenescentGSE19898 1798530 1798997 467 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
12451 EST chr19 1774035 1775300 95 mRNA TCEB3BP1 chr19 1766246 1799450Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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